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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107887399   protein PHYLLO, chloroplastic 
 ath-u.5   PHYLLO   2-oxoglutarate decarboxylase/hydro-lyase/magnesium ion-binding protein 
 gma-u.5   121173896   protein PHYLLO, chloroplastic 
 gma-u.5   106794262   protein PHYLLO, chloroplastic 
 gma-u.5   100798570   protein PHYLLO, chloroplastic 
 vvi-u.5   100241089   protein PHYLLO, chloroplastic 
 ppo-u.5   7482230   protein PHYLLO, chloroplastic 
 mtr-u.5   25501491   protein PHYLLO, chloroplastic 
 sly-u.5   101245351   protein PHYLLO, chloroplastic 
 osa-u.5   4329786   protein PHYLLO, chloroplastic 

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Top 50 coexpressed genes to 107887399 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107887399 (ghi-r.1 coexpression data)

CoexMap"107887399"


ghiLOC107887399 | Entrez gene ID : 107887399    
Species ghi ath gma vvi ppo mtr sly osa bdi hvu bra cit bna sbi sot nta cre tae zma
Paralog 1 1 3 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00130 [list] [network] Ubiquinone and other terpenoid-quinone biosynthesis (102 genes)
ghi01240 [list] [network] Biosynthesis of cofactors (583 genes)
GO BP
GO:0009234 [list] [network] menaquinone biosynthetic process  (5 genes)  IEA  
GO:0009063 [list] [network] amino acid catabolic process  (197 genes)  IEA  
GO CC
GO MF
GO:0070204 [list] [network] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity  (2 genes)  IEA  
GO:0070205 [list] [network] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase activity  (2 genes)  IEA  
GO:0030976 [list] [network] thiamine pyrophosphate binding  (22 genes)  IEA  
Protein XP_016667115.2 [sequence] [blastp]
XP_016667116.2 [sequence] [blastp]
XP_016667117.2 [sequence] [blastp]
XP_016667119.2 [sequence] [blastp]
XP_016667120.2 [sequence] [blastp]
XP_040952061.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_016667115.2)
chlo 9  (predict for XP_016667116.2)
nucl 4,  cyto_nucl 4,  cyto 2,  cysk 1,  vacu 1,  E.R._vacu 1  (predict for XP_016667117.2)
nucl 4,  chlo 2,  cyto 2,  nucl_plas 2  (predict for XP_016667119.2)
nucl 4,  cyto_nucl 4,  cyto 2,  cysk 1,  vacu 1,  E.R._vacu 1  (predict for XP_016667120.2)
plas 2,  chlo 2,  nucl 2,  cysk_plas 1,  cyto 1,  vacu 1,  golg 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_040952061.1)
Subcellular
localization
TargetP
other 4  (predict for XP_016667115.2)
other 4  (predict for XP_016667116.2)
other 7  (predict for XP_016667117.2)
other 7  (predict for XP_016667119.2)
other 7  (predict for XP_016667120.2)
other 7  (predict for XP_040952061.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107887399
ath-u.5
for
PHYLLO
gma-u.5
for
121173896
gma-u.5
for
106794262
gma-u.5
for
100798570
vvi-u.5
for
100241089
ppo-u.5
for
7482230
mtr-u.5
for
25501491
sly-u.5
for
101245351
osa-u.5
for
4329786


Ortholog ID: 10544
Species ghi ghi ath bra bna cit gma gma vvi ppo mtr sly sot nta nta osa tae tae hvu sbi bdi cre
Symbol LOC107936532 LOC121212709 PHYLLO LOC103852540 LOC106393361 LOC102608540 LOC106794262 LOC100798570 LOC100241089 LOC7482230 LOC25501491 LOC101245351 LOC102603926 LOC107794793 LOC107804357 LOC4329786 LOC123127572 LOC123137052 LOC123401275 LOC8055409 LOC100843372 CHLRE_16g659050v5
Function* protein PHYLLO, chloroplastic protein PHYLLO, chloroplastic 2-oxoglutarate decarboxylase/hydro-lyase/magnesium ion-binding protein protein PHYLLO, chloroplastic protein PHYLLO, chloroplastic protein PHYLLO, chloroplastic protein PHYLLO, chloroplastic protein PHYLLO, chloroplastic protein PHYLLO, chloroplastic protein PHYLLO, chloroplastic protein PHYLLO, chloroplastic protein PHYLLO, chloroplastic protein PHYLLO, chloroplastic protein PHYLLO, chloroplastic protein PHYLLO, chloroplastic protein PHYLLO, chloroplastic protein PHYLLO, chloroplastic protein PHYLLO, chloroplastic protein PHYLLO, chloroplastic protein PHYLLO, chloroplastic protein PHYLLO, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 3
ppo00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 3
sly01240 Biosynthesis of cofactors 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
sot00970 Aminoacyl-tRNA biosynthesis 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00051 Fructose and mannose metabolism 2
sbi00260 Glycine, serine and threonine metabolism 2
sbi00630 Glyoxylate and dicarboxylate metabolism 2
sbi00670 One carbon pool by folate 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 2
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107936532 121212709 843222 103852540 106393361 102608540 106794262 100798570 100241089 7482230 25501491 101245351 102603926 107794793 107804357 4329786 123127572 123137052 123401275 8055409 100843372 5723475
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