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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107888315   40S ribosomal protein S21 
 ath-u.5   AT3G53890   Ribosomal protein S21e 
 ath-u.5   AT5G27700   Ribosomal protein S21e 
 gma-u.5   100499937   40S ribosomal protein S21 
 gma-u.5   100817753   40S ribosomal protein S21 
 vvi-u.5   100246017   small ribosomal subunit protein eS21 
 vvi-u.5   100266516   small ribosomal subunit protein eS21 
 ppo-u.5   18098676   40S ribosomal protein S21-2 
 ppo-u.5   7481738   40S ribosomal protein S21-2 
 mtr-u.5   25488134   40S ribosomal protein S21-2 
 sly-u.5   101254027   small ribosomal subunit protein eS21y 
 sly-u.5   101245249   small ribosomal subunit protein eS21-like 
 sly-u.5   101244950   small ribosomal subunit protein eS21-like 
 osa-u.5   4333672   small ribosomal subunit protein eS21-like 
 osa-u.5   4332813   40S ribosomal protein S21-like 
 zma-u.5   542449   40S ribosomal protein S21 
 zma-u.5   103630203   40S ribosomal protein S21-like 
 zma-u.5   542458   40S ribosomal subunit protein S21 

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Top 50 coexpressed genes to 107888315 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107888315 (ghi-r.1 coexpression data)

CoexMap"107888315"


ghiLOC107888315 | Entrez gene ID : 107888315    
Species ghi ath gma vvi ppo mtr sly osa zma hvu bna cit bra sbi bdi nta tae cre sot
Paralog 1 2 2 2 2 1 3 2 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0000461 [list] [network] endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (8 genes)  IEA  
GO:0000447 [list] [network] endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (18 genes)  IEA  
GO:0006412 [list] [network] translation  (1487 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (268 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
Protein XP_016667874.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 7,  chlo 1,  nucl 1  (predict for XP_016667874.1)
Subcellular
localization
TargetP
other 7  (predict for XP_016667874.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107888315
ath-u.5
for
AT3G53890
ath-u.5
for
AT5G27700
gma-u.5
for
100499937
gma-u.5
for
100817753
vvi-u.5
for
100246017
vvi-u.5
for
100266516
ppo-u.5
for
18098676
ppo-u.5
for
7481738
mtr-u.5
for
25488134
sly-u.5
for
101254027
sly-u.5
for
101245249
sly-u.5
for
101244950
osa-u.5
for
4333672
osa-u.5
for
4332813
zma-u.5
for
542449
zma-u.5
for
103630203
zma-u.5
for
542458


Ortholog ID: 1756
Species ghi ghi ath ath bra bna cit cit gma vvi vvi ppo ppo mtr sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC107930881 LOC107893282 AT5G27700 AT3G53890 LOC103841308 LOC106380032 LOC102609459 LOC102611170 LOC100817753 LOC100246017 LOC100266516 LOC7481738 LOC18098676 LOC25488134 LOC101244950 LOC101245249 LOC102581028 LOC102591827 LOC107793454 LOC107800934 LOC4332813 LOC4333672 LOC103625731 LOC103630203 LOC123091976 LOC123085849 LOC123424781 LOC123448626 LOC8082666 LOC8062964 LOC100837758 LOC100840852 CHLRE_03g203450v5
Function* 40S ribosomal protein S21 40S ribosomal protein S21 Ribosomal protein S21e Ribosomal protein S21e 40S ribosomal protein S21-2 40S ribosomal protein S21-2-like 40S ribosomal protein S21-like 40S ribosomal protein S21-2 40S ribosomal protein S21 small ribosomal subunit protein eS21 small ribosomal subunit protein eS21 40S ribosomal protein S21-2 40S ribosomal protein S21-2 40S ribosomal protein S21-2 small ribosomal subunit protein eS21-like small ribosomal subunit protein eS21-like 40S ribosomal protein S21-2 40S ribosomal protein S21-like small ribosomal subunit protein eS21 small ribosomal subunit protein eS21 40S ribosomal protein S21-like small ribosomal subunit protein eS21-like 40S ribosomal protein S21-like 40S ribosomal protein S21-like 40S ribosomal protein S21 40S ribosomal protein S21 40S ribosomal protein S21-like 40S ribosomal protein S21 40S ribosomal protein S21 40S ribosomal protein S21 40S ribosomal protein S21 40S ribosomal protein S21 ribosomal protein S21
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 17
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 20
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107930881 107893282 832832 824556 103841308 106380032 102609459 102611170 100817753 100246017 100266516 7481738 18098676 25488134 101244950 101245249 102581028 102591827 107793454 107800934 4332813 4333672 103625731 103630203 123091976 123085849 123424781 123448626 8082666 8062964 100837758 100840852 5718886
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