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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107888709   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 ghi-r.1   107912637   serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' 
 ghi-r.1   107914461   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 ghi-r.1   107886802   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 ath-u.5   ATB' ALPHA   Protein phosphatase 2A regulatory B subunit family protein 
 ath-u.5   AT1G13460   Protein phosphatase 2A regulatory B subunit family protein 
 ath-u.5   AT5G25510   Protein phosphatase 2A regulatory B subunit family protein 
 bra-r.6   103869158   serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' 
 bra-r.6   103859278   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 bra-r.6   103854746   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 bna-r.1   125580230   serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' 
 bna-r.1   125608792   serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' 
 bna-r.1   111214244   serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' 
 cit-r.1   102606617   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 cit-r.1   102607694   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 cit-r.1   102612189   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 gma-u.5   100806230   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 gma-u.5   100807697   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 vvi-u.5   100253747   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 vvi-u.5   100252451   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 vvi-u.5   100258598   serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' 
 ppo-u.5   7496643   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 ppo-u.5   7480937   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 ppo-u.5   7477048   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 mtr-u.5   11429629   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 mtr-u.5   11431523   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 mtr-u.5   11432697   serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' 
 sly-u.5   101250942   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 sly-u.5   101257170   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 sly-u.5   101268818   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 sot-r.1   102581890   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 sot-r.1   102601978   serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' 
 sot-r.1   102600904   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 nta-r.1   107791655   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 nta-r.1   107798431   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 nta-r.1   107798666   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 osa-u.5   4337970   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 osa-u.5   4336207   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 osa-u.5   4334757   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 zma-u.5   100279581   uncharacterized LOC100279581 
 zma-u.5   100280472   uncharacterized LOC100280472 
 zma-u.5   100281610   uncharacterized LOC100281610 
 tae-r.2   123114282   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 tae-r.2   123090678   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 tae-r.2   123053680   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 hvu-r.1   123449661   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 hvu-r.1   123426814   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 hvu-r.1   123395059   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 sbi-r.1   8078786   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 sbi-r.1   8060891   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 sbi-r.1   8063560   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 bdi-r.1   100844608   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 bdi-r.1   100839164   serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' 
 cre-r.1   CHLRE_13g567800v5   uncharacterized protein 

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Top 50 coexpressed genes to 107888709 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107888709 (ghi-r.1 coexpression data)

CoexMap"107888709"


ghiLOC107888709 | Entrez gene ID : 107888709    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 3 2 3 3 3 3 3 3 3 3 3 3 3 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03015 [list] [network] mRNA surveillance pathway (365 genes)
ghi04382 [list] [network] Cornified envelope formation (106 genes)
GO BP
GO:0007165 [list] [network] signal transduction  (2209 genes)  IEA  
GO CC
GO:0000159 [list] [network] protein phosphatase type 2A complex  (85 genes)  IEA  
GO MF
GO:0019888 [list] [network] protein phosphatase regulator activity  (248 genes)  IEA  
Protein XP_016668375.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 3,  nucl 3,  chlo 2,  cyto_mito 2,  cysk 1,  golg_plas 1  (predict for XP_016668375.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_016668375.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107888709
ghi-r.1
for
107912637
ghi-r.1
for
107914461
ghi-r.1
for
107886802
ath-u.5
for
ATB' ALPHA
ath-u.5
for
AT1G13460
ath-u.5
for
AT5G25510
bra-r.6
for
103869158
bra-r.6
for
103859278
bra-r.6
for
103854746
bna-r.1
for
125580230
bna-r.1
for
125608792
bna-r.1
for
111214244
cit-r.1
for
102606617
cit-r.1
for
102607694
cit-r.1
for
102612189
gma-u.5
for
100806230
gma-u.5
for
100807697
vvi-u.5
for
100253747
vvi-u.5
for
100252451
vvi-u.5
for
100258598
ppo-u.5
for
7496643
ppo-u.5
for
7480937
ppo-u.5
for
7477048
mtr-u.5
for
11429629
mtr-u.5
for
11431523
mtr-u.5
for
11432697
sly-u.5
for
101250942
sly-u.5
for
101257170
sly-u.5
for
101268818
sot-r.1
for
102581890
sot-r.1
for
102601978
sot-r.1
for
102600904
nta-r.1
for
107791655
nta-r.1
for
107798431
nta-r.1
for
107798666
osa-u.5
for
4337970
osa-u.5
for
4336207
osa-u.5
for
4334757
zma-u.5
for
100279581
zma-u.5
for
100280472
zma-u.5
for
100281610
tae-r.2
for
123114282
tae-r.2
for
123090678
tae-r.2
for
123053680
hvu-r.1
for
123449661
hvu-r.1
for
123426814
hvu-r.1
for
123395059
sbi-r.1
for
8078786
sbi-r.1
for
8060891
sbi-r.1
for
8063560
bdi-r.1
for
100844608
bdi-r.1
for
100839164
cre-r.1
for
CHLRE_13g567800v5


Ortholog ID: 128
Species ghi ghi ghi ath ath ath bra bra bra bna bna bna cit cit cit gma gma gma vvi vvi vvi ppo ppo mtr mtr mtr sly sly sot sot sot nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi cre
Symbol LOC107905322 LOC107901208 LOC107953670 AT1G13460 ATB' GAMMA AT3G54930 LOC103850499 LOC103875328 LOC103875329 LOC111203344 LOC106396685 LOC106362625 LOC102606617 LOC102612491 LOC102629668 LOC100807697 LOC100814349 LOC100814863 LOC100253747 LOC100252451 LOC100258598 LOC7477048 LOC7468800 LOC11431523 LOC11446412 LOC25485642 LOC101268818 LOC101251646 LOC102597891 LOC102593611 LOC102588732 LOC107799077 LOC107813916 LOC4337970 LOC4336207 LOC4323870 LOC100279581 LOC100281610 LOC103646298 LOC123114282 LOC123040553 LOC123087656 LOC123449661 LOC123442995 LOC123400211 LOC8060164 LOC8072718 LOC8074049 LOC100844608 LOC100832862 LOC100823841 CHLRE_13g567800v5
Function* serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' Protein phosphatase 2A regulatory B subunit family protein Protein phosphatase 2A regulatory B subunit family protein Protein phosphatase 2A regulatory B subunit family protein serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' uncharacterized LOC100279581 uncharacterized LOC100281610 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
ath04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 5
ath04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra04382 Cornified envelope formation 2
bra04120 Ubiquitin mediated proteolysis 2
bra00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 6
bra04626 Plant-pathogen interaction 2
bra03015 mRNA surveillance pathway 2
bra04382 Cornified envelope formation 2
bra04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 5
bna04382 Cornified envelope formation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 3
bna04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 5
bna04382 Cornified envelope formation 5
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 4
cit03015 mRNA surveillance pathway 3
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
cit04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 3
gma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
ppo04144 Endocytosis 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
ppo04382 Cornified envelope formation 2
ppo04142 Lysosome 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
mtr04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 3
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 3
sot04120 Ubiquitin mediated proteolysis 3
sot04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
sot04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 4
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 3
nta04382 Cornified envelope formation 3
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
osa00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
zma03015 mRNA surveillance pathway 2
zma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
zma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 4
zma04382 Cornified envelope formation 4
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae04382 Cornified envelope formation 3
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae04382 Cornified envelope formation 3
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00520 Amino sugar and nucleotide sugar metabolism 2
hvu01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04814 Motor proteins 3
sbi03015 mRNA surveillance pathway 2
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04814 Motor proteins 6
bdi00040 Pentose and glucuronate interconversions 2
bdi00052 Galactose metabolism 2
bdi00500 Starch and sucrose metabolism 2
bdi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03015 mRNA surveillance pathway 2
cre00230 Purine metabolism 2
cre04148 Efferocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107905322 107901208 107953670 837906 827211 824658 103850499 103875328 103875329 111203344 106396685 106362625 102606617 102612491 102629668 100807697 100814349 100814863 100253747 100252451 100258598 7477048 7468800 11431523 11446412 25485642 101268818 101251646 102597891 102593611 102588732 107799077 107813916 4337970 4336207 4323870 100279581 100281610 103646298 123114282 123040553 123087656 123449661 123442995 123400211 8060164 8072718 8074049 100844608 100832862 100823841 5719079
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