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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107888758   40S ribosomal protein S20-2 
 ath-u.5   AT3G45030   Ribosomal protein S10p/S20e family protein 
 ath-u.5   AT3G47370   Ribosomal protein S10p/S20e family protein 
 ath-u.5   AT5G62300   Ribosomal protein S10p/S20e family protein 
 gma-u.5   100306473   40S ribosomal protein S20 
 gma-u.5   100819036   40S ribosomal protein S20-2 
 gma-u.5   100500017   40S ribosomal protein S20-2 
 vvi-u.5   100258347   40S ribosomal protein S20-2-like 
 ppo-u.5   7482146   40S ribosomal protein S20-1 
 ppo-u.5   7476756   40S ribosomal protein S20-1 
 mtr-u.5   11441953   40S ribosomal protein S20-2 
 mtr-u.5   11405904   40S ribosomal protein S20-2 
 mtr-u.5   11428199   40S ribosomal protein S20-2 
 sly-u.5   101245205   ribosomal protein S10p/S20e family protein 
 sly-u.5   101244904   small ribosomal subunit protein uS10y 
 osa-u.5   4332257   small ribosomal subunit protein uS10z/uS10x 
 osa-u.5   4340027   40S ribosomal protein S20-like 
 osa-u.5   4348185   small ribosomal subunit protein uS10z/uS10x 
 zma-u.5   103633583   40S ribosomal protein S20-2 
 zma-u.5   118473410   40S ribosomal protein S20-2 

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Top 50 coexpressed genes to 107888758 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107888758 (ghi-r.1 coexpression data)

CoexMap"107888758"


ghiLOC107888758 | Entrez gene ID : 107888758    
Species ghi ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna
Paralog 1 3 3 1 2 3 2 3 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0006412 [list] [network] translation  (1487 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (268 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
Protein XP_016668442.1 [sequence] [blastp]
XP_016668443.1 [sequence] [blastp]
XP_016668444.1 [sequence] [blastp]
XP_040933769.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  extr 1,  chlo 1,  E.R. 1,  cysk 1  (predict for XP_016668442.1)
cyto 6,  extr 1,  chlo 1,  E.R. 1,  cysk 1  (predict for XP_016668443.1)
cyto 6,  extr 1,  chlo 1,  E.R. 1,  cysk 1  (predict for XP_016668444.1)
cyto 6,  extr 1,  chlo 1,  E.R. 1,  cysk 1  (predict for XP_040933769.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016668442.1)
other 8  (predict for XP_016668443.1)
other 8  (predict for XP_016668444.1)
other 8  (predict for XP_040933769.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107888758

.
ath-u.5
for
AT3G45030

.
ath-u.5
for
AT3G47370

.
ath-u.5
for
AT5G62300

.
gma-u.5
for
100306473

.
gma-u.5
for
100819036

.
gma-u.5
for
100500017

.
vvi-u.5
for
100258347

.
ppo-u.5
for
7482146

.
ppo-u.5
for
7476756

.
mtr-u.5
for
11441953

.
mtr-u.5
for
11405904

.
mtr-u.5
for
11428199

.
sly-u.5
for
101245205

.
sly-u.5
for
101244904

.
osa-u.5
for
4332257

.
osa-u.5
for
4340027

.
osa-u.5
for
4348185

.
zma-u.5
for
103633583

.
zma-u.5
for
118473410

.


Ortholog ID: 1707
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi nta nta
Symbol AT3G47370 AT3G45030 LOC100813093 LOC100803623 LOC101245205 LOC101244904 LOC4348185 LOC4340027 LOC103633583 LOC118473410 LOC103857176 LOC103837034 LOC100258347 LOC7476756 LOC11441953 LOC11405904 LOC123088168 LOC123190591 LOC123397911 LOC123407968 LOC107933184 LOC107953666 LOC111213347 LOC106423861 CHLRE_16g660150v5 LOC8069075 LOC8078846 LOC102584651 LOC102589010 LOC102621376 LOC100838410 LOC107765328 LOC107784562
Function* Ribosomal protein S10p/S20e family protein Ribosomal protein S10p/S20e family protein 40S ribosomal protein S20-2 40S ribosomal protein S20-2-like ribosomal protein S10p/S20e family protein small ribosomal subunit protein uS10y small ribosomal subunit protein uS10z/uS10x 40S ribosomal protein S20-like 40S ribosomal protein S20-2 40S ribosomal protein S20-2 40S ribosomal protein S20-1-like 40S ribosomal protein S20-2 40S ribosomal protein S20-2-like 40S ribosomal protein S20-1 40S ribosomal protein S20-2 40S ribosomal protein S20-2 40S ribosomal protein S20 40S ribosomal protein S20 40S ribosomal protein S20-like 40S ribosomal protein S20 40S ribosomal protein S20-2 40S ribosomal protein S20-2 40S ribosomal protein S20-1 40S ribosomal protein S20-1 uncharacterized protein 40S ribosomal protein S20 40S ribosomal protein S20-2 40S ribosomal protein S20-2 40S ribosomal protein S20-2-like 40S ribosomal protein S20-2 40S ribosomal protein S20 small ribosomal subunit protein uS10y small ribosomal subunit protein uS10y
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
gma03008 Ribosome biogenesis in eukaryotes 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 18
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 12
bra03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 9
hvu03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 13
bna03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 17
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 16
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 823891 823638 100813093 100803623 101245205 101244904 4348185 4340027 103633583 118473410 103857176 103837034 100258347 7476756 11441953 11405904 123088168 123190591 123397911 123407968 107933184 107953666 111213347 106423861 5723488 8069075 8078846 102584651 102589010 102621376 100838410 107765328 107784562
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