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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107888797   histidine biosynthesis bifunctional protein hisIE, chloroplastic 
 ath-u.5   AT-IE   histidine biosynthesis bifunctional protein (HISIE) 
 gma-u.5   100807276   histidine biosynthesis bifunctional protein hisIE, chloroplastic-like 
 vvi-u.5   100258301   histidine biosynthesis bifunctional protein hisIE, chloroplastic 
 ppo-u.5   18095493   histidine biosynthesis bifunctional protein hisIE, chloroplastic 
 mtr-u.5   25498966   histidine biosynthesis bifunctional protein hisIE, chloroplastic 
 sly-u.5   101244621   histidine biosynthesis bifunctional protein hisIE, chloroplastic 
 osa-u.5   4324261   histidine biosynthesis bifunctional protein hisIE, chloroplastic 
 zma-u.5   100284200   histidine biosynthesis bifunctional protein hisIE 

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Top 50 coexpressed genes to 107888797 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107888797 (ghi-r.1 coexpression data)

CoexMap"107888797"


ghiLOC107888797 | Entrez gene ID : 107888797    
Species ghi ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00340 [list] [network] Histidine metabolism (41 genes)
ghi01230 [list] [network] Biosynthesis of amino acids (568 genes)
GO BP
GO:0000105 [list] [network] L-histidine biosynthetic process  (21 genes)  IEA  
GO CC
GO MF
GO:0004636 [list] [network] phosphoribosyl-ATP diphosphatase activity  (4 genes)  IEA  
GO:0004635 [list] [network] phosphoribosyl-AMP cyclohydrolase activity  (6 genes)  IEA  
Protein XP_016668510.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 1,  nucl 1,  extr 1,  cyto_mito 1,  mito_plas 1  (predict for XP_016668510.2)
Subcellular
localization
TargetP
chlo 2  (predict for XP_016668510.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107888797

.
ath-u.5
for
AT-IE

.
gma-u.5
for
100807276

.
vvi-u.5
for
100258301

.
ppo-u.5
for
18095493

.
mtr-u.5
for
25498966

.
sly-u.5
for
101244621

.
osa-u.5
for
4324261

.
zma-u.5
for
100284200

.


Ortholog ID: 7440
Species ath gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot cit bdi nta nta
Symbol AT-IE LOC100807276 LOC101244621 LOC4324261 LOC100284200 LOC103840211 LOC103868926 LOC100258301 LOC18095493 LOC25498966 LOC123078177 LOC123061105 LOC123443518 LOC107922436 LOC107945840 LOC125586955 LOC125608753 CHLRE_13g576650v5 LOC8074535 LOC8076670 LOC107061051 LOC102608490 LOC100840720 LOC107760493 LOC107784152
Function* histidine biosynthesis bifunctional protein (HISIE) histidine biosynthesis bifunctional protein hisIE, chloroplastic-like histidine biosynthesis bifunctional protein hisIE, chloroplastic histidine biosynthesis bifunctional protein hisIE, chloroplastic histidine biosynthesis bifunctional protein hisIE histidine biosynthesis bifunctional protein hisIE, chloroplastic histidine biosynthesis bifunctional protein hisIE, chloroplastic histidine biosynthesis bifunctional protein hisIE, chloroplastic histidine biosynthesis bifunctional protein hisIE, chloroplastic histidine biosynthesis bifunctional protein hisIE, chloroplastic histidine biosynthesis bifunctional protein hisIE, chloroplastic histidine biosynthesis bifunctional protein hisIE, chloroplastic histidine biosynthesis bifunctional protein hisIE, chloroplastic histidine biosynthesis bifunctional protein hisIE, chloroplastic histidine biosynthesis bifunctional protein hisIE, chloroplastic histidine biosynthesis bifunctional protein hisIE, chloroplastic-like histidine biosynthesis bifunctional protein hisIE, chloroplastic-like uncharacterized protein histidine biosynthesis bifunctional protein hisIE, chloroplastic histidine biosynthesis bifunctional protein hisIE, chloroplastic histidine biosynthesis bifunctional protein hisIE, chloroplastic histidine biosynthesis bifunctional protein hisIE, chloroplastic histidine biosynthesis bifunctional protein hisIE, chloroplastic histidine biosynthesis bifunctional protein hisIE, chloroplastic histidine biosynthesis bifunctional protein hisIE, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 12
ath01230 Biosynthesis of amino acids 2
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00061 Fatty acid biosynthesis 3
gma00620 Pyruvate metabolism 3
gma01200 Carbon metabolism 3
gma01212 Fatty acid metabolism 3
gma00780 Biotin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 13
sly01210 2-Oxocarboxylic acid metabolism 5
sly00300 Lysine biosynthesis 5
sly00260 Glycine, serine and threonine metabolism 4
sly00250 Alanine, aspartate and glutamate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 5
osa00290 Valine, leucine and isoleucine biosynthesis 2
osa01210 2-Oxocarboxylic acid metabolism 2
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 5
zma00250 Alanine, aspartate and glutamate metabolism 3
zma00190 Oxidative phosphorylation 3
zma00340 Histidine metabolism 3
zma00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
bra00340 Histidine metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 14
bra03008 Ribosome biogenesis in eukaryotes 3
bra00340 Histidine metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00270 Cysteine and methionine metabolism 4
tae00340 Histidine metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00270 Cysteine and methionine metabolism 4
tae00340 Histidine metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00340 Histidine metabolism 3
ghi01230 Biosynthesis of amino acids 3
ghi03410 Base excision repair 2
ghi03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00340 Histidine metabolism 3
ghi01230 Biosynthesis of amino acids 3
ghi03410 Base excision repair 2
ghi03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00340 Histidine metabolism 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00340 Histidine metabolism 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00340 Histidine metabolism 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi00340 Histidine metabolism 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 5
sot00190 Oxidative phosphorylation 4
sot00340 Histidine metabolism 3
sot00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
cit03008 Ribosome biogenesis in eukaryotes 2
cit00790 Folate biosynthesis 2
cit01240 Biosynthesis of cofactors 2
cit04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00230 Purine metabolism 2
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
nta03040 Spliceosome 3
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 840076 100807276 101244621 4324261 100284200 103840211 103868926 100258301 18095493 25498966 123078177 123061105 123443518 107922436 107945840 125586955 125608753 5719247 8074535 8076670 107061051 102608490 100840720 107760493 107784152
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