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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107888928   probable histone-arginine methyltransferase 1.3 
 ghi-r.1   107891864   probable histone-arginine methyltransferase 1.3 
 ghi-r.1   107896681   probable histone-arginine methyltransferase 1.3 
 ghi-r.1   107916158   probable histone-arginine methyltransferase 1.3 
 ath-u.5   PRMT4B   protein arginine methyltransferase 4B 
 ath-u.5   PRMT4A   protein arginine methyltransferase 4A 
 bra-r.6   103854570   probable histone-arginine methyltransferase 1.4 
 bra-r.6   103870714   probable histone-arginine methyltransferase 1.3 
 bra-r.6   103875014   probable histone-arginine methyltransferase 1.4 
 bna-r.1   106452981   probable histone-arginine methyltransferase 1.3 
 bna-r.1   106410415   probable histone-arginine methyltransferase 1.4 
 bna-r.1   106403169   probable histone-arginine methyltransferase 1.4 
 cit-r.1   102619550   probable histone-arginine methyltransferase 1.4 
 gma-u.5   100807771   probable histone-arginine methyltransferase 1.4 
 gma-u.5   100780736   probable histone-arginine methyltransferase 1.3 
 gma-u.5   100818828   probable histone-arginine methyltransferase 1.3 
 vvi-u.5   100245917   probable histone-arginine methyltransferase 1.3 
 ppo-u.5   18101781   probable histone-arginine methyltransferase 1.4 
 ppo-u.5   18102272   probable histone-arginine methyltransferase 1.4 
 mtr-u.5   11420237   probable histone-arginine methyltransferase 1.3 
 mtr-u.5   25488132   probable histone-arginine methyltransferase 1.4 
 sly-u.5   101245653   probable histone-arginine methyltransferase 1.3 
 sly-u.5   101259821   probable histone-arginine methyltransferase 1.3 
 sot-r.1   102588128   probable histone-arginine methyltransferase 1.3 
 sot-r.1   102604413   probable histone-arginine methyltransferase 1.3 
 nta-r.1   107786682   putative histone-arginine methyltransferase 1.3 
 nta-r.1   107771571   putative histone-arginine methyltransferase 1.3 
 nta-r.1   107816526   putative histone-arginine methyltransferase 1.3 
 osa-u.5   4344248   probable histone-arginine methyltransferase CARM1 
 zma-u.5   100191934   uncharacterized LOC100191934 
 zma-u.5   100284501   histone-arginine methyltransferase CARM1 
 tae-r.2   123051615   probable histone-arginine methyltransferase CARM1 
 tae-r.2   123043753   probable histone-arginine methyltransferase CARM1 
 tae-r.2   123187548   probable histone-arginine methyltransferase CARM1 
 hvu-r.1   123424773   probable histone-arginine methyltransferase CARM1 
 sbi-r.1   8078531   probable histone-arginine methyltransferase CARM1 
 bdi-r.1   100836224   probable histone-arginine methyltransferase CARM1 
 cre-r.1   CHLRE_15g635350v5   uncharacterized protein 

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Top 50 coexpressed genes to 107888928 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107888928 (ghi-r.1 coexpression data)

CoexMap"107888928"


ghiLOC107888928 | Entrez gene ID : 107888928    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 1 3 1 2 2 2 2 3 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0018216 [list] [network] peptidyl-arginine methylation  (60 genes)  IEA  
GO CC
GO MF
GO:0016274 [list] [network] protein-arginine N-methyltransferase activity  (64 genes)  IEA  
Protein XP_016668688.2 [sequence] [blastp]
XP_016668689.2 [sequence] [blastp]
XP_040933648.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  E.R. 3,  extr 1,  E.R._vacu 1,  nucl 1,  cyto 1,  mito 1,  plas 1,  cyto_nucl 1,  nucl_plas 1,  mito_plas 1,  cyto_plas 1  (predict for XP_016668688.2)
chlo 4,  E.R. 3,  extr 1,  E.R._vacu 1  (predict for XP_016668689.2)
chlo 3,  E.R. 3,  extr 1,  E.R._vacu 1,  nucl 1,  cyto 1,  mito 1,  plas 1,  cyto_nucl 1,  nucl_plas 1,  mito_plas 1,  cyto_plas 1  (predict for XP_040933648.1)
Subcellular
localization
TargetP
other 5,  chlo 4  (predict for XP_016668688.2)
other 5,  chlo 4  (predict for XP_016668689.2)
chlo 4,  other 4  (predict for XP_040933648.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107888928
ghi-r.1
for
107891864
ghi-r.1
for
107896681
ghi-r.1
for
107916158
ath-u.5
for
PRMT4B
ath-u.5
for
PRMT4A
bra-r.6
for
103854570
bra-r.6
for
103870714
bra-r.6
for
103875014
bna-r.1
for
106452981
bna-r.1
for
106410415
bna-r.1
for
106403169
cit-r.1
for
102619550
gma-u.5
for
100807771
gma-u.5
for
100780736
gma-u.5
for
100818828
vvi-u.5
for
100245917
ppo-u.5
for
18101781
ppo-u.5
for
18102272
mtr-u.5
for
11420237
mtr-u.5
for
25488132
sly-u.5
for
101245653
sly-u.5
for
101259821
sot-r.1
for
102588128
sot-r.1
for
102604413
nta-r.1
for
107786682
nta-r.1
for
107771571
nta-r.1
for
107816526
osa-u.5
for
4344248
zma-u.5
for
100191934
zma-u.5
for
100284501
tae-r.2
for
123051615
tae-r.2
for
123043753
tae-r.2
for
123187548
hvu-r.1
for
123424773
sbi-r.1
for
8078531
bdi-r.1
for
100836224
cre-r.1
for
CHLRE_15g635350v5


Ortholog ID: 3925
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit gma gma gma vvi ppo ppo mtr mtr sly sly sot sot nta nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC107888928 LOC107896681 LOC107931474 PRMT4B PRMT4A LOC103854570 LOC103870714 LOC103875014 LOC106403169 LOC106347615 LOC106348883 LOC102619550 LOC100807771 LOC100818828 LOC100809620 LOC100245917 LOC18101781 LOC18102272 LOC11420237 LOC25488132 LOC101245653 LOC101259821 LOC102588128 LOC102604413 LOC107771571 LOC107816526 LOC107811750 LOC4344248 LOC100191934 LOC100284501 LOC123051615 LOC123043753 LOC123187548 LOC123424773 LOC8078531 LOC100836224 CHLRE_15g635350v5
Function* probable histone-arginine methyltransferase 1.3 probable histone-arginine methyltransferase 1.3 probable histone-arginine methyltransferase 1.3 protein arginine methyltransferase 4B protein arginine methyltransferase 4A probable histone-arginine methyltransferase 1.4 probable histone-arginine methyltransferase 1.3 probable histone-arginine methyltransferase 1.4 probable histone-arginine methyltransferase 1.4 probable histone-arginine methyltransferase 1.4 probable histone-arginine methyltransferase 1.4 probable histone-arginine methyltransferase 1.4 probable histone-arginine methyltransferase 1.4 probable histone-arginine methyltransferase 1.3 probable histone-arginine methyltransferase 1.3 probable histone-arginine methyltransferase 1.3 probable histone-arginine methyltransferase 1.4 probable histone-arginine methyltransferase 1.4 probable histone-arginine methyltransferase 1.3 probable histone-arginine methyltransferase 1.4 probable histone-arginine methyltransferase 1.3 probable histone-arginine methyltransferase 1.3 probable histone-arginine methyltransferase 1.3 probable histone-arginine methyltransferase 1.3 putative histone-arginine methyltransferase 1.3 putative histone-arginine methyltransferase 1.3 putative histone-arginine methyltransferase 1.3 probable histone-arginine methyltransferase CARM1 uncharacterized LOC100191934 histone-arginine methyltransferase CARM1 probable histone-arginine methyltransferase CARM1 probable histone-arginine methyltransferase CARM1 probable histone-arginine methyltransferase CARM1 probable histone-arginine methyltransferase CARM1 probable histone-arginine methyltransferase CARM1 probable histone-arginine methyltransferase CARM1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 3
ath01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
ath03022 Basal transcription factors 2
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00590 Arachidonic acid metabolism 2
bna00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna00590 Arachidonic acid metabolism 2
bna00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00590 Arachidonic acid metabolism 2
bna00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 2
cit03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 6
gma03013 Nucleocytoplasmic transport 3
gma03015 mRNA surveillance pathway 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
ppo00970 Aminoacyl-tRNA biosynthesis 3
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 4
mtr04145 Phagosome 4
mtr03050 Proteasome 3
mtr04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03420 Nucleotide excision repair 3
sot04141 Protein processing in endoplasmic reticulum 2
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 5
nta00240 Pyrimidine metabolism 4
nta00250 Alanine, aspartate and glutamate metabolism 4
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 6
nta00250 Alanine, aspartate and glutamate metabolism 4
nta00240 Pyrimidine metabolism 3
nta00230 Purine metabolism 3
nta01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03015 mRNA surveillance pathway 4
tae03040 Spliceosome 4
tae03082 ATP-dependent chromatin remodeling 3
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 4
tae03410 Base excision repair 4
tae03420 Nucleotide excision repair 4
tae03430 Mismatch repair 4
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03015 mRNA surveillance pathway 4
tae03040 Spliceosome 4
tae03082 ATP-dependent chromatin remodeling 3
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 5
sbi03040 Spliceosome 3
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi03013 Nucleocytoplasmic transport 3
bdi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107888928 107896681 107931474 819878 834961 103854570 103870714 103875014 106403169 106347615 106348883 102619550 100807771 100818828 100809620 100245917 18101781 18102272 11420237 25488132 101245653 101259821 102588128 102604413 107771571 107816526 107811750 4344248 100191934 100284501 123051615 123043753 123187548 123424773 8078531 100836224 5726174
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