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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107888963   transcription factor MYB108 
 ghi-r.1   107912305   transcription factor MYB108-like 
 ghi-r.1   107910654   transcription factor MYB108 
 ghi-r.1   107910634   transcription factor MYB78 
 ath-u.5   MYB2   myb domain protein 2 
 ath-u.5   MYB62   myb domain protein 62 
 ath-u.5   MYB112   myb domain protein 112 
 bra-r.6   103829147   transcription factor MYB62 
 bra-r.6   103843831   transcription factor MYB78 
 bna-r.1   125599309   transcription factor MYB108 
 bna-r.1   106439087   transcription factor MYB108-like 
 bna-r.1   106436385   transcription factor MYB78-like 
 cit-r.1   102629992   transcription factor MYB108 
 cit-r.1   102622211   transcription factor MYB62 
 cit-r.1   102631084   transcription factor MYB62-like 
 vvi-u.5   100260647   R2R3 transcription factor MYB108-like protein 2 
 vvi-u.5   100248153   R2R3 transcription factor MYB108-like protein 1 
 vvi-u.5   100242243   transcription factor MYB62 
 ppo-u.5   7488366   transcription factor MYB62 
 ppo-u.5   7487068   transcription factor MYB62 
 mtr-u.5   11417084   MYB-like transcription factor EOBI 
 sly-u.5   101265734   transcription factor MYB78-like 
 sly-u.5   101246560   transcription factor MYB78-like 
 sot-r.1   102604269   transcription factor MYB108 
 sot-r.1   102606117   transcription factor MYB108 
 nta-r.1   107828503   transcription factor MYB78 
 nta-r.1   107775455   transcription factor MYB62-like 
 nta-r.1   107823467   transcription factor MYB78-like 
 osa-u.5   4332651   transcription factor MYB2-like 
 osa-u.5   4325992   transcription factor MYB62 
 osa-u.5   4326726   MYB-like transcription factor EOBI 
 zma-u.5   100272451   uncharacterized LOC100272451 
 zma-u.5   100273260   MYB transcription factor 
 zma-u.5   100274036   uncharacterized LOC100274036 
 hvu-r.1   123396706   transcription factor JAMYB-like 
 sbi-r.1   8060313   transcription factor JAMYB 
 sbi-r.1   8073365   transcription factor MYB2 
 sbi-r.1   8085988   transcription factor JAMYB 
 bdi-r.1   100820870   transcription factor MYB2 
 bdi-r.1   100825980   transcription factor JAMYB 

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Top 50 coexpressed genes to 107888963 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107888963 (ghi-r.1 coexpression data)

CoexMap"107888963"


ghiLOC107888963 | Entrez gene ID : 107888963    
Species ghi ath bra bna cit vvi ppo mtr sly sot nta osa zma hvu sbi bdi gma cre tae
Paralog 4 3 2 3 3 3 2 1 2 2 3 3 3 1 3 2 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (1947 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3140 genes)  IEA  
Protein XP_016668730.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1,  mito 1,  plas 1,  mito_plas 1,  cyto_plas 1  (predict for XP_016668730.2)
Subcellular
localization
TargetP
other 9  (predict for XP_016668730.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107888963
ghi-r.1
for
107912305
ghi-r.1
for
107910654
ghi-r.1
for
107910634
ath-u.5
for
MYB2
ath-u.5
for
MYB62
ath-u.5
for
MYB112
bra-r.6
for
103829147
bra-r.6
for
103843831
bna-r.1
for
125599309
bna-r.1
for
106439087
bna-r.1
for
106436385
cit-r.1
for
102629992
cit-r.1
for
102622211
cit-r.1
for
102631084
vvi-u.5
for
100260647
vvi-u.5
for
100248153
vvi-u.5
for
100242243
ppo-u.5
for
7488366
ppo-u.5
for
7487068
mtr-u.5
for
11417084
sly-u.5
for
101265734
sly-u.5
for
101246560
sot-r.1
for
102604269
sot-r.1
for
102606117
nta-r.1
for
107828503
nta-r.1
for
107775455
nta-r.1
for
107823467
osa-u.5
for
4332651
osa-u.5
for
4325992
osa-u.5
for
4326726
zma-u.5
for
100272451
zma-u.5
for
100273260
zma-u.5
for
100274036
hvu-r.1
for
123396706
sbi-r.1
for
8060313
sbi-r.1
for
8073365
sbi-r.1
for
8085988
bdi-r.1
for
100820870
bdi-r.1
for
100825980


Ortholog ID: 246
Species ghi ghi ghi ath ath ath bra bra bra bna bna bna cit cit cit gma vvi vvi vvi ppo ppo mtr sly sly sly sot sot nta nta nta osa osa zma zma zma tae hvu hvu sbi sbi sbi bdi
Symbol LOC107895302 LOC121213975 LOC107931405 MYB2 MYB112 MYB108 LOC103866398 LOC103854617 LOC103870743 LOC106370075 LOC106399744 LOC106431748 LOC102629992 LOC102622211 LOC102615104 LOC100819467 LOC100260647 LOC100248153 LOC100242243 LOC7487068 LOC7468120 LOC11413842 LOC101265734 LOC101246560 AIM1 LOC102606117 LOC102591265 LOC107800846 LOC107760394 LOC107827213 LOC4352537 LOC4344354 LOC100384300 LOC541731 LOC109939245 LOC123172628 LOC123439195 LOC123429416 LOC8073365 LOC8068183 LOC8068182 LOC100825980
Function* transcription factor MYB108 MYB-like transcription factor EOBI transcription factor MYB78 myb domain protein 2 myb domain protein 112 myb domain protein 108 transcription factor MYB78 transcription factor MYB78 transcription factor MYB108 transcription factor MYB78 transcription factor MYB62 transcription factor MYB108-like transcription factor MYB108 transcription factor MYB62 transcription factor MYB78 uncharacterized LOC100819467 R2R3 transcription factor MYB108-like protein 2 R2R3 transcription factor MYB108-like protein 1 transcription factor MYB62 transcription factor MYB62 transcription factor MYB108 transcription factor JAMYB transcription factor MYB78-like transcription factor MYB78-like ABA-induced MYB transcription factor transcription factor MYB108 transcription factor MYB108-like transcription factor MYB78 transcription factor MYB62 transcription factor MYB62 transcription factor JAMYB-like myb-related protein 340 uncharacterized LOC100384300 transcription factor JAMYB transcription factor MYB108-like transcription factor JAMYB transcription factor MYB62-like transcription factor MYB2-like transcription factor MYB2 transcription factor JAMYB transcription factor MYB2 transcription factor JAMYB
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 4
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 3
ath00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 2
ath00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00960 Tropane, piperidine and pyridine alkaloid biosynthesis 4
bna04016 MAPK signaling pathway - plant 2
bna04075 Plant hormone signal transduction 2
bna04626 Plant-pathogen interaction 2
bna00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04146 Peroxisome 3
cit00592 alpha-Linolenic acid metabolism 3
cit00071 Fatty acid degradation 3
cit00280 Valine, leucine and isoleucine degradation 3
cit00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
vvi00040 Pentose and glucuronate interconversions 3
vvi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00040 Pentose and glucuronate interconversions 4
vvi04075 Plant hormone signal transduction 3
vvi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 3
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00520 Amino sugar and nucleotide sugar metabolism 2
sly04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 4
sly04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 4
sot04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 4
sot04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00601 Glycosphingolipid biosynthesis - lacto and neolacto series 2
nta00603 Glycosphingolipid biosynthesis - globo and isoglobo series 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 3
osa00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00480 Glutathione metabolism 2
bdi00592 alpha-Linolenic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107895302 121213975 107931405 819332 841218 819827 103866398 103854617 103870743 106370075 106399744 106431748 102629992 102622211 102615104 100819467 100260647 100248153 100242243 7487068 7468120 11413842 101265734 101246560 100271699 102606117 102591265 107800846 107760394 107827213 4352537 4344354 100384300 541731 109939245 123172628 123439195 123429416 8073365 8068183 8068182 100825980
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