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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107889612   probable E3 ubiquitin-protein ligase ZFP1 
 ghi-r.1   107891118   probable E3 ubiquitin-protein ligase ZFP1 
 ath-u.5   AT2G37150   RING/U-box superfamily protein 
 bra-r.6   103857659   E3 ubiquitin-protein ligase MBR2 
 bra-r.6   103865579   E3 ubiquitin-protein ligase MBR2 
 bna-r.1   106391503   probable E3 ubiquitin-protein ligase ZFP1 
 bna-r.1   106441063   E3 ubiquitin-protein ligase MBR2-like 
 bna-r.1   106447396   E3 ubiquitin-protein ligase MBR2-like 
 cit-r.1   102607362   probable E3 ubiquitin-protein ligase ZFP1 
 gma-u.5   547939   probable E3 ubiquitin-protein ligase RHG1A 
 gma-u.5   100803627   probable E3 ubiquitin-protein ligase RHG1A 
 gma-u.5   100786013   probable E3 ubiquitin-protein ligase RHG1A 
 vvi-u.5   100249661   uncharacterized LOC100249661 
 vvi-u.5   100263731   probable E3 ubiquitin-protein ligase HIP1 
 ppo-u.5   7458651   probable E3 ubiquitin-protein ligase ZFP1 
 mtr-u.5   11432972   probable E3 ubiquitin-protein ligase RHG1A 
 mtr-u.5   11431193   probable E3 ubiquitin-protein ligase HIP1 
 mtr-u.5   11425603   nuclear pore complex protein NUP98B 
 sly-u.5   101251216   uncharacterized LOC101251216 
 sot-r.1   102589403   uncharacterized LOC102589403 
 nta-r.1   107793464   uncharacterized LOC107793464 
 nta-r.1   107819737   uncharacterized LOC107819737 

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Top 50 coexpressed genes to 107889612 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107889612 (ghi-r.1 coexpression data)

CoexMap"107889612"


ghiLOC107889612 | Entrez gene ID : 107889612    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta bdi osa tae zma cre sbi hvu
Paralog 2 1 2 3 1 3 2 1 3 1 1 2 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (513 genes)  IEA  
Protein XP_016669596.1 [sequence] [blastp]
XP_016669598.1 [sequence] [blastp]
XP_040932689.1 [sequence] [blastp]
XP_040932690.1 [sequence] [blastp]
XP_040932691.1 [sequence] [blastp]
XP_040932692.1 [sequence] [blastp]
XP_040932693.1 [sequence] [blastp]
XP_040932694.1 [sequence] [blastp]
XP_040932695.1 [sequence] [blastp]
XP_040932696.1 [sequence] [blastp]
XP_040932697.1 [sequence] [blastp]
XP_040932698.1 [sequence] [blastp]
XP_040932699.1 [sequence] [blastp]
XP_040932700.1 [sequence] [blastp]
XP_040932701.1 [sequence] [blastp]
XP_040932702.1 [sequence] [blastp]
XP_040932703.1 [sequence] [blastp]
XP_040932704.1 [sequence] [blastp]
XP_040932705.1 [sequence] [blastp]
XP_040932706.1 [sequence] [blastp]
XP_040932707.1 [sequence] [blastp]
XP_040932708.1 [sequence] [blastp]
XP_040932709.1 [sequence] [blastp]
XP_040932710.1 [sequence] [blastp]
XP_040932711.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_016669596.1)
nucl 10  (predict for XP_016669598.1)
nucl 10  (predict for XP_040932689.1)
nucl 10  (predict for XP_040932690.1)
nucl 10  (predict for XP_040932691.1)
nucl 10  (predict for XP_040932692.1)
nucl 10  (predict for XP_040932693.1)
nucl 10  (predict for XP_040932694.1)
nucl 10  (predict for XP_040932695.1)
nucl 10  (predict for XP_040932696.1)
nucl 10  (predict for XP_040932697.1)
nucl 10  (predict for XP_040932698.1)
nucl 10  (predict for XP_040932699.1)
nucl 10  (predict for XP_040932700.1)
nucl 10  (predict for XP_040932701.1)
nucl 10  (predict for XP_040932702.1)
nucl 10  (predict for XP_040932703.1)
nucl 10  (predict for XP_040932704.1)
nucl 10  (predict for XP_040932705.1)
nucl 10  (predict for XP_040932706.1)
nucl 10  (predict for XP_040932707.1)
nucl 10  (predict for XP_040932708.1)
nucl 10  (predict for XP_040932709.1)
nucl 10  (predict for XP_040932710.1)
nucl 9,  cyto_nucl 5  (predict for XP_040932711.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016669596.1)
other 8  (predict for XP_016669598.1)
other 8  (predict for XP_040932689.1)
other 8  (predict for XP_040932690.1)
other 8  (predict for XP_040932691.1)
other 8  (predict for XP_040932692.1)
other 8  (predict for XP_040932693.1)
other 8  (predict for XP_040932694.1)
other 8  (predict for XP_040932695.1)
other 8  (predict for XP_040932696.1)
other 8  (predict for XP_040932697.1)
other 8  (predict for XP_040932698.1)
other 8  (predict for XP_040932699.1)
other 8  (predict for XP_040932700.1)
other 8  (predict for XP_040932701.1)
other 8  (predict for XP_040932702.1)
other 8  (predict for XP_040932703.1)
other 8  (predict for XP_040932704.1)
other 8  (predict for XP_040932705.1)
other 8  (predict for XP_040932706.1)
other 8  (predict for XP_040932707.1)
other 8  (predict for XP_040932708.1)
other 8  (predict for XP_040932709.1)
other 8  (predict for XP_040932710.1)
other 8  (predict for XP_040932711.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107889612
ghi-r.1
for
107891118
ath-u.5
for
AT2G37150
bra-r.6
for
103857659
bra-r.6
for
103865579
bna-r.1
for
106391503
bna-r.1
for
106441063
bna-r.1
for
106447396
cit-r.1
for
102607362
gma-u.5
for
547939
gma-u.5
for
100803627
gma-u.5
for
100786013
vvi-u.5
for
100249661
vvi-u.5
for
100263731
ppo-u.5
for
7458651
mtr-u.5
for
11432972
mtr-u.5
for
11431193
mtr-u.5
for
11425603
sly-u.5
for
101251216
sot-r.1
for
102589403
nta-r.1
for
107793464
nta-r.1
for
107819737


Ortholog ID: 9423
Species ghi ghi ath bra bra bna bna bna cit gma gma gma vvi vvi ppo mtr mtr mtr sly sot nta nta
Symbol LOC107889612 LOC107891118 AT2G37150 LOC103857659 LOC103865579 LOC106441063 LOC106447396 LOC106392693 LOC102607362 LOC547939 LOC100803627 LOC100786013 LOC100249661 LOC100263731 LOC7458651 LOC11432972 LOC11431193 LOC11425603 LOC101251216 LOC102589403 LOC107793464 LOC107819737
Function* probable E3 ubiquitin-protein ligase ZFP1 probable E3 ubiquitin-protein ligase ZFP1 RING/U-box superfamily protein E3 ubiquitin-protein ligase MBR2 E3 ubiquitin-protein ligase MBR2 E3 ubiquitin-protein ligase MBR2-like E3 ubiquitin-protein ligase MBR2-like E3 ubiquitin-protein ligase MBR2 probable E3 ubiquitin-protein ligase ZFP1 probable E3 ubiquitin-protein ligase RHG1A probable E3 ubiquitin-protein ligase RHG1A probable E3 ubiquitin-protein ligase RHG1A uncharacterized LOC100249661 probable E3 ubiquitin-protein ligase HIP1 probable E3 ubiquitin-protein ligase ZFP1 probable E3 ubiquitin-protein ligase RHG1A probable E3 ubiquitin-protein ligase HIP1 nuclear pore complex protein NUP98B uncharacterized LOC101251216 uncharacterized LOC102589403 uncharacterized LOC107793464 uncharacterized LOC107819737
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03250 Viral life cycle - HIV-1 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107889612 107891118 818291 103857659 103865579 106441063 106447396 106392693 102607362 547939 100803627 100786013 100249661 100263731 7458651 11432972 11431193 11425603 101251216 102589403 107793464 107819737
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