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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107889624   40S ribosomal protein S23 
 ghi-r.1   121230463   40S ribosomal protein S23 
 ghi-r.1   107957395   40S ribosomal protein S23 
 ghi-r.1   107942655   40S ribosomal protein S23 
 ath-u.5   AT3G09680   Ribosomal protein S12/S23 family protein 
 ath-u.5   AT5G02960   Ribosomal protein S12/S23 family protein 
 bra-r.6   103859285   40S ribosomal protein S23-2 
 bna-r.1   125581363   40S ribosomal protein S23-2 
 bna-r.1   106427936   40S ribosomal protein S23-2 
 bna-r.1   106424083   40S ribosomal protein S23-2 
 cit-r.1   102622281   40S ribosomal protein S23 
 cit-r.1   102627205   40S ribosomal protein S23 
 gma-u.5   100776345   40S ribosomal protein S23-like 
 gma-u.5   100500013   40S ribosomal protein S23 
 gma-u.5   100796694   40S ribosomal protein S23 
 vvi-u.5   100265528   small ribosomal subunit protein uS12 
 vvi-u.5   100248226   small ribosomal subunit protein uS12 
 vvi-u.5   100242825   small ribosomal subunit protein uS12 
 ppo-u.5   7457888   40S ribosomal protein S23 
 ppo-u.5   7489626   40S ribosomal protein S23 
 ppo-u.5   7465301   40S ribosomal protein S23 
 mtr-u.5   25484043   40S ribosomal protein S23 
 mtr-u.5   11434751   40S ribosomal protein S23-2 
 sly-u.5   101257002   small ribosomal subunit protein uS12 
 sly-u.5   101252131   40S ribosomal protein S23 
 sly-u.5   101252449   small ribosomal subunit protein uS12 
 sot-r.1   102606349   40S ribosomal protein S23 
 sot-r.1   102582696   40S ribosomal protein S23 
 sot-r.1   102577739   uncharacterized LOC102577739 
 nta-r.1   107811880   small ribosomal subunit protein uS12 
 nta-r.1   107799116   small ribosomal subunit protein uS12 
 nta-r.1   107775858   small ribosomal subunit protein uS12 
 osa-u.5   4327414   40S ribosomal protein S23 
 osa-u.5   4334580   40S ribosomal protein S23 
 osa-u.5   9266509   40S ribosomal protein S23 
 zma-u.5   103630443   40S ribosomal protein S23 
 zma-u.5   101027156   40S ribosomal protein S23 
 zma-u.5   103644248   40S ribosomal protein S23 
 tae-r.2   123059459   40S ribosomal protein S23 
 tae-r.2   123079656   40S ribosomal protein S23 
 tae-r.2   123182298   40S ribosomal protein S23 
 hvu-r.1   123453009   40S ribosomal protein S23 
 hvu-r.1   123398301   40S ribosomal protein S23 
 hvu-r.1   123445205   40S ribosomal protein S23 
 sbi-r.1   8057378   40S ribosomal protein S23 
 sbi-r.1   8085434   40S ribosomal protein S23 
 sbi-r.1   8072558   40S ribosomal protein S23 
 bdi-r.1   100832317   40S ribosomal protein S23 
 bdi-r.1   100832951   40S ribosomal protein S23 
 cre-r.1   CHLRE_12g504200v5   ribosomal protein S23 

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Top 50 coexpressed genes to 107889624 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107889624 (ghi-r.1 coexpression data)

CoexMap"107889624"


ghiLOC107889624 | Entrez gene ID : 107889624    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 1 3 2 3 3 3 2 3 3 3 3 3 3 3 3 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0006412 [list] [network] translation  (1487 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (268 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
Protein XP_016669616.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 2,  chlo 1  (predict for XP_016669616.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_016669616.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107889624
ghi-r.1
for
121230463
ghi-r.1
for
107957395
ghi-r.1
for
107942655
ath-u.5
for
AT3G09680
ath-u.5
for
AT5G02960
bra-r.6
for
103859285
bna-r.1
for
125581363
bna-r.1
for
106427936
bna-r.1
for
106424083
cit-r.1
for
102622281
cit-r.1
for
102627205
gma-u.5
for
100776345
gma-u.5
for
100500013
gma-u.5
for
100796694
vvi-u.5
for
100265528
vvi-u.5
for
100248226
vvi-u.5
for
100242825
ppo-u.5
for
7457888
ppo-u.5
for
7489626
ppo-u.5
for
7465301
mtr-u.5
for
25484043
mtr-u.5
for
11434751
sly-u.5
for
101257002
sly-u.5
for
101252131
sly-u.5
for
101252449
sot-r.1
for
102606349
sot-r.1
for
102582696
sot-r.1
for
102577739
nta-r.1
for
107811880
nta-r.1
for
107799116
nta-r.1
for
107775858
osa-u.5
for
4327414
osa-u.5
for
4334580
osa-u.5
for
9266509
zma-u.5
for
103630443
zma-u.5
for
101027156
zma-u.5
for
103644248
tae-r.2
for
123059459
tae-r.2
for
123079656
tae-r.2
for
123182298
hvu-r.1
for
123453009
hvu-r.1
for
123398301
hvu-r.1
for
123445205
sbi-r.1
for
8057378
sbi-r.1
for
8085434
sbi-r.1
for
8072558
bdi-r.1
for
100832317
bdi-r.1
for
100832951
cre-r.1
for
CHLRE_12g504200v5


Ortholog ID: 1202
Species ghi ghi ghi ath ath bra bra bna bna bna cit cit gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi cre
Symbol LOC121230463 LOC107905281 LOC107904092 AT3G09680 AT5G02960 LOC103859285 LOC103848030 LOC106424083 LOC106372613 LOC106439190 LOC102622281 LOC102627205 LOC100500013 LOC100796694 LOC100306064 LOC100265528 LOC100248226 LOC100242825 LOC7489626 LOC7465301 LOC18100230 LOC25484043 LOC11434751 LOC101257002 LOC101252131 LOC101252449 LOC102606349 LOC102577739 LOC102589849 LOC107811880 LOC107799116 LOC107812875 LOC4334580 LOC9266509 LOC4348383 LOC101027156 LOC103644248 LOC103625771 LOC123059459 LOC123136323 LOC123123461 LOC123453009 LOC123398301 LOC123445205 LOC8057378 LOC8085434 LOC8072558 LOC100832317 LOC100832951 CHLRE_12g504200v5
Function* 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23 Ribosomal protein S12/S23 family protein Ribosomal protein S12/S23 family protein 40S ribosomal protein S23-2 40S ribosomal protein S23-2 40S ribosomal protein S23-2 40S ribosomal protein S23-2 40S ribosomal protein S23-2 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23 small ribosomal subunit protein uS12 small ribosomal subunit protein uS12 small ribosomal subunit protein uS12 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23-2 small ribosomal subunit protein uS12 40S ribosomal protein S23 small ribosomal subunit protein uS12 40S ribosomal protein S23 uncharacterized LOC102577739 40S ribosomal protein S23 small ribosomal subunit protein uS12 small ribosomal subunit protein uS12 small ribosomal subunit protein uS12 40S ribosomal protein S23 40S ribosomal protein S23 small ribosomal subunit protein uS12 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23-like 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23 40S ribosomal protein S23 ribosomal protein S23
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
ghi00261 Monobactam biosynthesis 3
ghi00300 Lysine biosynthesis 3
ghi01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
ath03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 14
bra03040 Spliceosome 4
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 11
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 16
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 10
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 20
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 20
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 18
nta04120 Ubiquitin mediated proteolysis 2
nta00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 16
nta03018 RNA degradation 3
nta00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 10
tae03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 13
hvu04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 18
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 19
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121230463 107905281 107904092 820125 831724 103859285 103848030 106424083 106372613 106439190 102622281 102627205 100500013 100796694 100306064 100265528 100248226 100242825 7489626 7465301 18100230 25484043 11434751 101257002 101252131 101252449 102606349 102577739 102589849 107811880 107799116 107812875 4334580 9266509 4348383 101027156 103644248 103625771 123059459 123136323 123123461 123453009 123398301 123445205 8057378 8085434 8072558 100832317 100832951 5716444
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