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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107890499   methylenetetrahydrofolate reductase 2 
 ath-u.5   MTHFR2   methylenetetrahydrofolate reductase 2 
 ath-u.5   MTHFR1   methylenetetrahydrofolate reductase 1 
 gma-u.5   100782073   methylenetetrahydrofolate reductase 2 
 gma-u.5   100797489   methylenetetrahydrofolate reductase 2 
 vvi-u.5   100259124   probable methylenetetrahydrofolate reductase (NADH) 
 ppo-u.5   7465595   methylenetetrahydrofolate reductase 2 
 ppo-u.5   18106383   methylenetetrahydrofolate reductase 2 
 mtr-u.5   25482865   methylenetetrahydrofolate reductase 2 
 sly-u.5   101261413   probable methylenetetrahydrofolate reductase (NADH) 
 sly-u.5   101255258   methylenetetrahydrofolate reductase (NADH) 2 
 osa-u.5   4334554   probable methylenetetrahydrofolate reductase 
 zma-u.5   541794   Methylenetetrahydrofolate reductase 1 
 zma-u.5   118474709   methylenetetrahydrofolate reductase 1-like 

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Top 50 coexpressed genes to 107890499 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107890499 (ghi-r.1 coexpression data)

CoexMap"107890499"


ghiLOC107890499 | Entrez gene ID : 107890499    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 2 2 1 2 1 2 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00670 [list] [network] One carbon pool by folate (103 genes)
ghi01200 [list] [network] Carbon metabolism (681 genes)
GO BP
GO:0035999 [list] [network] tetrahydrofolate interconversion  (38 genes)  IEA  
GO:0009086 [list] [network] methionine biosynthetic process  (45 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (2580 genes)  IEA  
GO MF
GO:0004489 [list] [network] methylenetetrahydrofolate reductase [NAD(P)H] activity  (4 genes)  IEA  
GO:0071949 [list] [network] FAD binding  (191 genes)  IEA  
Protein XP_016670451.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  chlo 1,  cysk 1,  cysk_plas 1  (predict for XP_016670451.2)
Subcellular
localization
TargetP
other 7  (predict for XP_016670451.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107890499
ath-u.5
for
MTHFR2
ath-u.5
for
MTHFR1
gma-u.5
for
100782073
gma-u.5
for
100797489
vvi-u.5
for
100259124
ppo-u.5
for
7465595
ppo-u.5
for
18106383
mtr-u.5
for
25482865
sly-u.5
for
101261413
sly-u.5
for
101255258
osa-u.5
for
4334554
zma-u.5
for
541794
zma-u.5
for
118474709


Ortholog ID: 4368
Species ghi ghi ath ath bra bra bna bna cit gma gma vvi ppo ppo mtr sly sly sot sot nta nta osa zma zma tae tae hvu sbi bdi cre
Symbol LOC107890499 LOC107915116 MTHFR2 MTHFR1 LOC103866125 LOC103841853 LOC106405655 LOC106396447 LOC102631468 LOC100797489 LOC100782073 LOC100259124 LOC18106383 LOC7465595 LOC25482865 LOC101255258 LOC101261413 LOC102598073 LOC102596086 LOC107808152 LOC107761305 LOC4334554 LOC541794 LOC118474709 LOC123105606 LOC123113925 LOC123452953 LOC8057390 LOC100846793 CHLRE_10g433600v5
Function* methylenetetrahydrofolate reductase 2 methylenetetrahydrofolate reductase 2 methylenetetrahydrofolate reductase 2 methylenetetrahydrofolate reductase 1 methylenetetrahydrofolate reductase 2 methylenetetrahydrofolate reductase 1 methylenetetrahydrofolate reductase 1 methylenetetrahydrofolate reductase 2 methylenetetrahydrofolate reductase 2-like methylenetetrahydrofolate reductase 2 methylenetetrahydrofolate reductase 2 probable methylenetetrahydrofolate reductase (NADH) methylenetetrahydrofolate reductase 2 methylenetetrahydrofolate reductase 2 methylenetetrahydrofolate reductase 2 methylenetetrahydrofolate reductase (NADH) 2 probable methylenetetrahydrofolate reductase (NADH) methylenetetrahydrofolate reductase 2-like probable methylenetetrahydrofolate reductase probable methylenetetrahydrofolate reductase putative methylenetetrahydrofolate reductase (NADH) probable methylenetetrahydrofolate reductase Methylenetetrahydrofolate reductase 1 methylenetetrahydrofolate reductase 1-like probable methylenetetrahydrofolate reductase probable methylenetetrahydrofolate reductase probable methylenetetrahydrofolate reductase methylenetetrahydrofolate reductase 1 probable methylenetetrahydrofolate reductase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00670 One carbon pool by folate 4
ghi01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00670 One carbon pool by folate 4
ghi01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 8
ath00670 One carbon pool by folate 6
ath00270 Cysteine and methionine metabolism 5
ath00941 Flavonoid biosynthesis 4
ath00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 8
ath00670 One carbon pool by folate 8
ath00270 Cysteine and methionine metabolism 7
ath01200 Carbon metabolism 4
ath01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00670 One carbon pool by folate 10
bra00270 Cysteine and methionine metabolism 9
bra01230 Biosynthesis of amino acids 7
bra01240 Biosynthesis of cofactors 5
bra01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00670 One carbon pool by folate 4
bna01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00670 One carbon pool by folate 4
bna01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 11
cit00270 Cysteine and methionine metabolism 8
cit00670 One carbon pool by folate 8
cit01240 Biosynthesis of cofactors 6
cit01200 Carbon metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 9
gma00670 One carbon pool by folate 8
gma01200 Carbon metabolism 8
gma00270 Cysteine and methionine metabolism 7
gma00260 Glycine, serine and threonine metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 10
gma00670 One carbon pool by folate 7
gma01200 Carbon metabolism 7
gma00270 Cysteine and methionine metabolism 6
gma00260 Glycine, serine and threonine metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00670 One carbon pool by folate 4
vvi01200 Carbon metabolism 3
vvi00520 Amino sugar and nucleotide sugar metabolism 2
vvi00260 Glycine, serine and threonine metabolism 2
vvi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 14
ppo00670 One carbon pool by folate 8
ppo00270 Cysteine and methionine metabolism 8
ppo01240 Biosynthesis of cofactors 6
ppo00630 Glyoxylate and dicarboxylate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01250 Biosynthesis of nucleotide sugars 7
ppo01240 Biosynthesis of cofactors 5
ppo00541 Biosynthesis of various nucleotide sugars 5
ppo00520 Amino sugar and nucleotide sugar metabolism 4
ppo00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 11
mtr00670 One carbon pool by folate 7
mtr00270 Cysteine and methionine metabolism 6
mtr00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
mtr00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00670 One carbon pool by folate 8
sly01200 Carbon metabolism 6
sly01230 Biosynthesis of amino acids 6
sly01240 Biosynthesis of cofactors 5
sly00270 Cysteine and methionine metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 9
sly00670 One carbon pool by folate 8
sly01200 Carbon metabolism 8
sly01240 Biosynthesis of cofactors 5
sly00260 Glycine, serine and threonine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00670 One carbon pool by folate 9
sot01230 Biosynthesis of amino acids 7
sot01200 Carbon metabolism 5
sot01240 Biosynthesis of cofactors 5
sot00270 Cysteine and methionine metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00670 One carbon pool by folate 8
sot00270 Cysteine and methionine metabolism 5
sot01230 Biosynthesis of amino acids 5
sot01200 Carbon metabolism 4
sot01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 7
nta01230 Biosynthesis of amino acids 6
nta00670 One carbon pool by folate 6
nta00270 Cysteine and methionine metabolism 4
nta00450 Selenocompound metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 9
nta01200 Carbon metabolism 8
nta00270 Cysteine and methionine metabolism 8
nta00450 Selenocompound metabolism 6
nta00670 One carbon pool by folate 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 5
osa00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
osa00940 Phenylpropanoid biosynthesis 3
osa00941 Flavonoid biosynthesis 3
osa00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 10
zma00270 Cysteine and methionine metabolism 5
zma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
zma01200 Carbon metabolism 4
zma00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 9
zma00270 Cysteine and methionine metabolism 5
zma00670 One carbon pool by folate 5
zma01200 Carbon metabolism 4
zma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 9
tae00270 Cysteine and methionine metabolism 8
tae00450 Selenocompound metabolism 6
tae01200 Carbon metabolism 6
tae00670 One carbon pool by folate 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 7
tae01200 Carbon metabolism 5
tae00270 Cysteine and methionine metabolism 4
tae00450 Selenocompound metabolism 4
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00270 Cysteine and methionine metabolism 4
hvu01230 Biosynthesis of amino acids 4
hvu00670 One carbon pool by folate 4
hvu01200 Carbon metabolism 3
hvu01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00670 One carbon pool by folate 6
sbi00270 Cysteine and methionine metabolism 5
sbi01230 Biosynthesis of amino acids 5
sbi01240 Biosynthesis of cofactors 3
sbi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 9
bdi00270 Cysteine and methionine metabolism 4
bdi01200 Carbon metabolism 4
bdi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
bdi00670 One carbon pool by folate 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 6
cre00270 Cysteine and methionine metabolism 6
cre00670 One carbon pool by folate 5
cre01200 Carbon metabolism 4
cre00260 Glycine, serine and threonine metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107890499 107915116 819022 825167 103866125 103841853 106405655 106396447 102631468 100797489 100782073 100259124 18106383 7465595 25482865 101255258 101261413 102598073 102596086 107808152 107761305 4334554 541794 118474709 123105606 123113925 123452953 8057390 100846793 5728030
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