ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107890558	endochitinase EP3
ghi-r.1	107957190	endochitinase EP3
ghi-r.1	107957193	endochitinase EP3
ghi-r.1	107957194	endochitinase EP3
ath-u.5	AT2G43590	Chitinase family protein
ath-u.5	EP3	homolog of carrot EP3-3 chitinase
ath-u.5	AT3G47540	Chitinase family protein
bra-r.6	103841355	endochitinase EP3
bra-r.6	103857315	endochitinase At2g43590
bra-r.6	103867366	endochitinase At2g43590
bna-r.1	125603597	endochitinase At2g43590-like
bna-r.1	111205097	endochitinase At2g43590-like
bna-r.1	125609313	endochitinase At2g43590-like
cit-r.1	CHI1	chitinase CHI1
cit-r.1	112495548	chitinase 4-like
cit-r.1	102607842	endochitinase EP3-like
gma-u.5	100779462	endochitinase A
gma-u.5	100778526	endochitinase PR4-like
vvi-u.5	100257850	endochitinase PR4
vvi-u.5	100256098	endochitinase EP3
ppo-u.5	7466811	endochitinase WIN8
ppo-u.5	7467474	endochitinase PR4
ppo-u.5	7497095	endochitinase PR4
mtr-u.5	11435251	endochitinase PR4
mtr-u.5	25487916	endochitinase PR4
sly-u.5	101256086	endochitinase EP3
sly-u.5	101243897	endochitinase PR4-like
sot-r.1	102583127	endochitinase EP3
sot-r.1	102583535	endochitinase PR4-like
nta-r.1	107831802	endochitinase EP3-like
nta-r.1	107777898	chitinase 4-like
osa-u.5	4336265	chitinase 5-like
osa-u.5	4329920	chitinase 6-like
zma-u.5	100283208	uncharacterized LOC100283208
zma-u.5	100216890	Endochitinase B
tae-r.2	543492	chitinase 5
tae-r.2	123041575	chitinase 5-like
tae-r.2	543494	agglutinin isolectin 2-like
hvu-r.1	123427105	chitinase 5-like
hvu-r.1	123427107	chitinase 4-like
hvu-r.1	123430460	chitinase 5-like
sbi-r.1	8073715	endochitinase A
sbi-r.1	8056503	chitinase 6
sbi-r.1	8060191	endochitinase A
bdi-r.1	100823655	chitinase 4
bdi-r.1	100836367	agglutinin isolectin 3
bdi-r.1	100836672	agglutinin isolectin 3

Top 50 coexpressed genes to 107890558 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107890558 (ghi-r.1 coexpression data)

CoexMap"107890558"

[Cytoscape]

Annotation

functional annotation

KEGG

ghi00520 [list] [network] Amino sugar and nucleotide sugar metabolism (312 genes)

GO BP

GO:0016998 [list] [network] cell wall macromolecule catabolic process	(36 genes)	IEA
GO:0006032 [list] [network] chitin catabolic process	(46 genes)	IEA
GO:0005975 [list] [network] carbohydrate metabolic process	(1780 genes)	IEA

GO CC

GO MF

GO:0008061 [list] [network] chitin binding	(45 genes)	IEA
GO:0004568 [list] [network] chitinase activity	(61 genes)	IEA

Protein

XP_016670534.1 [sequence] [blastp]

Subcellular
localization
wolf

extr 4, chlo 2, vacu 2, golg 1

(predict for XP_016670534.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_016670534.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107890558	ghi-r.1 for 107957190	ghi-r.1 for 107957193	ghi-r.1 for 107957194	ath-u.5 for AT2G43590	ath-u.5 for EP3	ath-u.5 for AT3G47540	bra-r.6 for 103841355	bra-r.6 for 103857315	bra-r.6 for 103867366	bna-r.1 for 125603597	bna-r.1 for 111205097	bna-r.1 for 125609313	cit-r.1 for CHI1	cit-r.1 for 112495548	cit-r.1 for 102607842	gma-u.5 for 100779462	gma-u.5 for 100778526	vvi-u.5 for 100257850	vvi-u.5 for 100256098	ppo-u.5 for 7466811	ppo-u.5 for 7467474	ppo-u.5 for 7497095	mtr-u.5 for 11435251	mtr-u.5 for 25487916	sly-u.5 for 101256086	sly-u.5 for 101243897	sot-r.1 for 102583127	sot-r.1 for 102583535	nta-r.1 for 107831802	nta-r.1 for 107777898	osa-u.5 for 4336265	osa-u.5 for 4329920	zma-u.5 for 100283208	zma-u.5 for 100216890	tae-r.2 for 543492	tae-r.2 for 123041575	tae-r.2 for 543494	hvu-r.1 for 123427105	hvu-r.1 for 123427107	hvu-r.1 for 123430460	sbi-r.1 for 8073715	sbi-r.1 for 8056503	sbi-r.1 for 8060191	bdi-r.1 for 100823655	bdi-r.1 for 100836367	bdi-r.1 for 100836672

Ortholog

Ortholog ID: 512

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

EP3

CHI1

Function^*

endochitinase EP3

Chitinase family protein

homolog of carrot EP3-3 chitinase

endochitinase EP3

basic endochitinase CHB4

endochitinase At2g43580

endochitinase At2g43590-like

endochitinase At2g43610

chitinase CHI1

endochitinase EP3-like

chitinase 4-like

endochitinase PR4-like

endochitinase PR4

chitinase 5-like

endochitinase EP3

endochitinase WIN8

basic endochitinase CHB4

endochitinase EP3

endochitinase PR4

endochitinase EP3

endochitinase PR4-like

endochitinase EP3

endochitinase PR4-like

chitinase 4-like

endochitinase EP3-like

endochitinase EP3

chitinase 5-like

chitinase 4-like

uncharacterized LOC100283208

Endochitinase B

Endochitinase EP3

chitinase 5

agglutinin isolectin 2-like

root-specific lectin-like

chitinase 5-like

chitinase 4-like

chitinase 5-like

endochitinase A

agglutinin isolectin 3

chitinase 6

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04016	MAPK signaling pathway - plant	4
ath00520	Amino sugar and nucleotide sugar metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00520	Amino sugar and nucleotide sugar metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00520	Amino sugar and nucleotide sugar metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00520	Amino sugar and nucleotide sugar metabolism	6
cit04626	Plant-pathogen interaction	2
cit00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00061	Fatty acid biosynthesis	3
cit01040	Biosynthesis of unsaturated fatty acids	3
cit01212	Fatty acid metabolism	3
cit00520	Amino sugar and nucleotide sugar metabolism	2
cit00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00520	Amino sugar and nucleotide sugar metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00062	Fatty acid elongation	2
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00520	Amino sugar and nucleotide sugar metabolism	4
gma00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	3
vvi04626	Plant-pathogen interaction	2
vvi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00480	Glutathione metabolism	8
vvi00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00520	Amino sugar and nucleotide sugar metabolism	2
ppo04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00520	Amino sugar and nucleotide sugar metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00520	Amino sugar and nucleotide sugar metabolism	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00520	Amino sugar and nucleotide sugar metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00520	Amino sugar and nucleotide sugar metabolism	4
mtr04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00940	Phenylpropanoid biosynthesis	3
sly00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00592	alpha-Linolenic acid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00520	Amino sugar and nucleotide sugar metabolism	3
nta00010	Glycolysis / Gluconeogenesis	2
nta00020	Citrate cycle (TCA cycle)	2
nta00270	Cysteine and methionine metabolism	2
nta00566	Sulfoquinovose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00520	Amino sugar and nucleotide sugar metabolism	3
nta04016	MAPK signaling pathway - plant	2
nta04070	Phosphatidylinositol signaling system	2
nta04075	Plant hormone signal transduction	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00520	Amino sugar and nucleotide sugar metabolism	3
nta00010	Glycolysis / Gluconeogenesis	2
nta00020	Citrate cycle (TCA cycle)	2
nta00270	Cysteine and methionine metabolism	2
nta00566	Sulfoquinovose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00520	Amino sugar and nucleotide sugar metabolism	4
osa04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04626	Plant-pathogen interaction	3
osa00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00520	Amino sugar and nucleotide sugar metabolism	2
zma04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00520	Amino sugar and nucleotide sugar metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00520	Amino sugar and nucleotide sugar metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00520	Amino sugar and nucleotide sugar metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00520	Amino sugar and nucleotide sugar metabolism	4
hvu04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00520	Amino sugar and nucleotide sugar metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00520	Amino sugar and nucleotide sugar metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00520	Amino sugar and nucleotide sugar metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00520	Amino sugar and nucleotide sugar metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

107890558

107890557

121206305

818961

824608

103841355

103847766

103858079

125603597

106385920

102578024

102610864

127901463

100778526

100776582

100257850

100252703

100244031

7466811

7498090

18108499

11435251

25487916

101256086

101243897

102583127

102583535

107777898

107778881

107760646

4336265

4336263

100283208

100216890

100384000

543492

543494

123095816

123427105

123427107

123430460

8060191

8060192

8060193

100836367

100836672

100842264

The preparation time of this page was 0.1 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	3	3	2	2	3	2	2	2	2	2	2	3	3	3	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107890558 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107890558 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**