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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107890567   E3 ubiquitin-protein ligase PRT1 
 ath-u.5   PRT1   proteolysis 1 
 gma-u.5   100787174   E3 ubiquitin-protein ligase PRT1 
 gma-u.5   100782681   E3 ubiquitin-protein ligase PRT1 
 vvi-u.5   100260196   E3 ubiquitin-protein ligase PRT1 
 ppo-u.5   7493207   E3 ubiquitin-protein ligase PRT1 
 ppo-u.5   18094522   E3 ubiquitin-protein ligase PRT1 
 ppo-u.5   7488562   E3 ubiquitin-protein ligase PRT1 
 mtr-u.5   11420563   E3 ubiquitin-protein ligase PRT1 
 mtr-u.5   11411594   E3 ubiquitin-protein ligase PRT1 
 sly-u.5   101262151   E3 ubiquitin-protein ligase PRT1 
 osa-u.5   4330014   E3 ubiquitin-protein ligase PRT1 
 zma-u.5   109939984   E3 ubiquitin-protein ligase PRT1 

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Top 50 coexpressed genes to 107890567 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107890567 (ghi-r.1 coexpression data)

CoexMap"107890567"


ghiLOC107890567 | Entrez gene ID : 107890567    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 1 2 1 3 2 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (406 genes)  IEA  
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (513 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (1753 genes)  IEA  
Protein XP_016670542.2 [sequence] [blastp]
XP_016670543.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  vacu 1  (predict for XP_016670542.2)
nucl 9,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_016670543.2)
Subcellular
localization
TargetP
other 8  (predict for XP_016670542.2)
other 7  (predict for XP_016670543.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107890567
ath-u.5
for
PRT1
gma-u.5
for
100787174
gma-u.5
for
100782681
vvi-u.5
for
100260196
ppo-u.5
for
7493207
ppo-u.5
for
18094522
ppo-u.5
for
7488562
mtr-u.5
for
11420563
mtr-u.5
for
11411594
sly-u.5
for
101262151
osa-u.5
for
4330014
zma-u.5
for
109939984


Ortholog ID: 5118
Species ghi ghi ath bra bra bna bna cit cit gma gma vvi ppo ppo mtr mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre cre
Symbol LOC107942922 LOC107887198 PRT1 LOC103860257 LOC103828597 LOC106434821 LOC106435360 LOC102619512 LOC102612140 LOC100782681 LOC100787174 LOC100260196 LOC7488562 LOC7493207 LOC11411594 LOC11420563 LOC101262151 LOC102587216 LOC107765323 LOC107810129 LOC4330014 LOC109939984 LOC123144853 LOC123127747 LOC123401481 LOC8072488 LOC100834226 CHLRE_01g007350v5 CHLRE_02g098200v5
Function* E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 proteolysis 1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1-like E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 7
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 3
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 5
bna04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
vvi03050 Proteasome 3
vvi00190 Oxidative phosphorylation 2
vvi04142 Lysosome 2
vvi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04517 IgSF CAM signaling 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04146 Peroxisome 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04142 Lysosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107942922 107887198 822078 103860257 103828597 106434821 106435360 102619512 102612140 100782681 100787174 100260196 7488562 7493207 11411594 11420563 101262151 102587216 107765323 107810129 4330014 109939984 123144853 123127747 123401481 8072488 100834226 5725832 5725587
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