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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107890741   scarecrow-like protein 8 
 ghi-r.1   121223602   scarecrow-like protein 8 
 ghi-r.1   107951278   scarecrow-like protein 8 
 ghi-r.1   107932707   scarecrow-like protein 8 
 ath-u.5   SCL8   SCARECROW-like 8 
 bra-r.6   103832441   scarecrow-like protein 8 
 bra-r.6   103852095   scarecrow-like protein 8 
 bna-r.1   106416553   scarecrow-like protein 8 
 bna-r.1   106403371   scarecrow-like protein 8 
 bna-r.1   106394269   scarecrow-like protein 8 
 cit-r.1   102611148   scarecrow-like protein 8 
 gma-u.5   100788551   scarecrow-like protein 8 
 gma-u.5   100797571   scarecrow-like protein 8 
 gma-u.5   100800097   scarecrow-like protein 8 
 vvi-u.5   100261057   scarecrow-like protein 8 
 ppo-u.5   7493597   scarecrow-like protein 8 
 ppo-u.5   18106519   scarecrow-like protein 8 
 mtr-u.5   25496406   scarecrow-like protein 8 
 sly-u.5   100037501   scarecrow-like protein 8 
 sly-u.5   GRAS10   GRAS10 protein 
 sot-r.1   102601000   scarecrow-like protein 8 
 sot-r.1   102587836   scarecrow-like protein 8 
 nta-r.1   107792020   scarecrow-like protein 8 
 nta-r.1   107806673   scarecrow-like protein 8 
 osa-u.5   4336759   scarecrow-like protein 8 
 osa-u.5   4330327   scarecrow-like protein 8 
 zma-u.5   100281548   uncharacterized LOC100281548 
 zma-u.5   100273177   uncharacterized LOC100273177 
 zma-u.5   103646038   scarecrow-like protein 8 
 tae-r.2   123189988   scarecrow-like protein 8 
 tae-r.2   123054100   scarecrow-like protein 8 
 tae-r.2   123046229   scarecrow-like protein 8 
 hvu-r.1   123427425   scarecrow-like protein 8 
 sbi-r.1   8060431   scarecrow-like protein 8 
 sbi-r.1   8073212   scarecrow-like protein 8 
 bdi-r.1   100838548   scarecrow-like protein 8 

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Top 50 coexpressed genes to 107890741 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107890741 (ghi-r.1 coexpression data)

CoexMap"107890741"


ghiLOC107890741 | Entrez gene ID : 107890741    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 2 3 1 3 1 2 1 2 2 2 2 3 3 1 2 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (1947 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3140 genes)  IEA  
Protein XP_016670756.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_016670756.1)
Subcellular
localization
TargetP
other 7  (predict for XP_016670756.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107890741
ghi-r.1
for
121223602
ghi-r.1
for
107951278
ghi-r.1
for
107932707
ath-u.5
for
SCL8
bra-r.6
for
103832441
bra-r.6
for
103852095
bna-r.1
for
106416553
bna-r.1
for
106403371
bna-r.1
for
106394269
cit-r.1
for
102611148
gma-u.5
for
100788551
gma-u.5
for
100797571
gma-u.5
for
100800097
vvi-u.5
for
100261057
ppo-u.5
for
7493597
ppo-u.5
for
18106519
mtr-u.5
for
25496406
sly-u.5
for
100037501
sly-u.5
for
GRAS10
sot-r.1
for
102601000
sot-r.1
for
102587836
nta-r.1
for
107792020
nta-r.1
for
107806673
osa-u.5
for
4336759
osa-u.5
for
4330327
zma-u.5
for
100281548
zma-u.5
for
100273177
zma-u.5
for
103646038
tae-r.2
for
123189988
tae-r.2
for
123054100
tae-r.2
for
123046229
hvu-r.1
for
123427425
sbi-r.1
for
8060431
sbi-r.1
for
8073212
bdi-r.1
for
100838548


Ortholog ID: 4992
Species ghi ghi ghi ath bra bra bna bna bna cit gma gma gma vvi ppo ppo mtr sly sly sot sot nta nta osa osa zma zma zma tae tae tae hvu sbi sbi bdi
Symbol LOC107890741 LOC107932707 LOC107904600 SCL8 LOC103832441 LOC103852095 LOC106403371 LOC106394269 LOC106391423 LOC102611148 LOC100788551 LOC100797571 LOC100800097 LOC100261057 LOC7493597 LOC18106519 LOC25496406 LOC100037501 GRAS10 LOC102601000 LOC102587836 LOC107792020 LOC107806673 LOC4336759 LOC4330327 LOC100281548 LOC100273177 LOC103646038 LOC123189988 LOC123054100 LOC123046229 LOC123427425 LOC8060431 LOC8073212 LOC100838548
Function* scarecrow-like protein 8 scarecrow-like protein 8 scarecrow-like protein 8 SCARECROW-like 8 scarecrow-like protein 8 scarecrow-like protein 8 scarecrow-like protein 8 scarecrow-like protein 8 scarecrow-like protein 8 scarecrow-like protein 8 scarecrow-like protein 8 scarecrow-like protein 8 scarecrow-like protein 8 scarecrow-like protein 8 scarecrow-like protein 8 scarecrow-like protein 8 scarecrow-like protein 8 scarecrow-like protein 8 GRAS10 protein scarecrow-like protein 8 scarecrow-like protein 8 scarecrow-like protein 8 scarecrow-like protein 8 scarecrow-like protein 8 scarecrow-like protein 8 uncharacterized LOC100281548 uncharacterized LOC100273177 scarecrow-like protein 8 scarecrow-like protein 8 scarecrow-like protein 8 scarecrow-like protein 8 scarecrow-like protein 8 scarecrow-like protein 8 scarecrow-like protein 8 scarecrow-like protein 8
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 3
ath04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00541 Biosynthesis of various nucleotide sugars 3
gma01250 Biosynthesis of nucleotide sugars 3
gma00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00053 Ascorbate and aldarate metabolism 2
gma00520 Amino sugar and nucleotide sugar metabolism 2
gma01240 Biosynthesis of cofactors 2
gma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 4
vvi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00670 One carbon pool by folate 8
ppo01230 Biosynthesis of amino acids 5
ppo01240 Biosynthesis of cofactors 5
ppo01200 Carbon metabolism 4
ppo00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 4
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
nta04626 Plant-pathogen interaction 2
nta03060 Protein export 2
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 2
zma04075 Plant hormone signal transduction 2
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03083 Polycomb repressive complex 3
bdi04120 Ubiquitin mediated proteolysis 3
bdi04141 Protein processing in endoplasmic reticulum 3
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107890741 107932707 107904600 835327 103832441 103852095 106403371 106394269 106391423 102611148 100788551 100797571 100800097 100261057 7493597 18106519 25496406 100037501 100037502 102601000 102587836 107792020 107806673 4336759 4330327 100281548 100273177 103646038 123189988 123054100 123046229 123427425 8060431 8073212 100838548
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