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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107891029   arginine biosynthesis bifunctional protein ArgJ, chloroplastic 
 ghi-r.1   107889708   arginine biosynthesis bifunctional protein ArgJ, chloroplastic 
 ath-u.5   AT2G37500   arginine biosynthesis protein ArgJ family 
 bra-r.6   103867192   arginine biosynthesis bifunctional protein ArgJ, chloroplastic 
 bra-r.6   103865603   arginine biosynthesis bifunctional protein ArgJ, chloroplastic 
 bna-r.1   106396267   arginine biosynthesis bifunctional protein ArgJ, chloroplastic-like 
 bna-r.1   106447369   arginine biosynthesis bifunctional protein ArgJ, chloroplastic 
 bna-r.1   106451035   arginine biosynthesis bifunctional protein ArgJ, chloroplastic 
 cit-r.1   102609577   arginine biosynthesis bifunctional protein ArgJ, chloroplastic 
 gma-u.5   100809669   arginine biosynthesis bifunctional protein ArgJ, chloroplastic 
 gma-u.5   100809547   arginine biosynthesis bifunctional protein ArgJ, chloroplastic 
 vvi-u.5   100253362   arginine biosynthesis bifunctional protein ArgJ, chloroplastic-like 
 ppo-u.5   18103861   arginine biosynthesis bifunctional protein ArgJ, chloroplastic 
 mtr-u.5   25484110   arginine biosynthesis bifunctional protein ArgJ, chloroplastic 
 sly-u.5   101265059   arginine biosynthesis bifunctional protein ArgJ, chloroplastic 
 sot-r.1   102586102   arginine biosynthesis bifunctional protein ArgJ, chloroplastic 
 nta-r.1   107783830   arginine biosynthesis bifunctional protein ArgJ, chloroplastic 
 nta-r.1   107799701   arginine biosynthesis bifunctional protein ArgJ, chloroplastic 
 osa-u.5   4332434   arginine biosynthesis bifunctional protein ArgJ, chloroplastic-like 
 zma-u.5   100383335   Arginine biosynthesis bifunctional protein ArgJ, chloroplastic Glutamate N-acetyltransferase Amino-acid acetyltransferase Arginine biosynthesis bifunctional protein ArgJ alpha chain Arginine biosynthesis bifunctional protein ArgJ beta chain 
 tae-r.2   123092565   arginine biosynthesis bifunctional protein ArgJ, chloroplastic 
 tae-r.2   123085481   arginine biosynthesis bifunctional protein ArgJ, chloroplastic 
 tae-r.2   123097867   arginine biosynthesis bifunctional protein ArgJ, chloroplastic 
 hvu-r.1   123448990   arginine biosynthesis bifunctional protein ArgJ, chloroplastic 
 sbi-r.1   8081475   arginine biosynthesis bifunctional protein ArgJ, chloroplastic 
 bdi-r.1   100822892   arginine biosynthesis bifunctional protein ArgJ, chloroplastic 
 cre-r.1   CHLRE_16g694850v5   uncharacterized protein 

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Top 50 coexpressed genes to 107891029 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107891029 (ghi-r.1 coexpression data)

CoexMap"107891029"


ghiLOC107891029 | Entrez gene ID : 107891029    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 2 3 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00220 [list] [network] Arginine biosynthesis (92 genes)
ghi01210 [list] [network] 2-Oxocarboxylic acid metabolism (211 genes)
ghi01230 [list] [network] Biosynthesis of amino acids (568 genes)
GO BP
GO:0006592 [list] [network] ornithine biosynthetic process  (2 genes)  IEA  
GO:0006526 [list] [network] L-arginine biosynthetic process  (23 genes)  IEA  
GO CC
GO MF
GO:0004358 [list] [network] L-glutamate N-acetyltransferase activity, acting on acetyl-L-ornithine as donor  (2 genes)  IEA  
GO:0004042 [list] [network] L-glutamate N-acetyltransferase activity  (8 genes)  IEA  
Protein XP_016671149.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 3,  extr 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_016671149.1)
Subcellular
localization
TargetP
other 5,  scret 3  (predict for XP_016671149.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107891029
ghi-r.1
for
107889708
ath-u.5
for
AT2G37500
bra-r.6
for
103867192
bra-r.6
for
103865603
bna-r.1
for
106396267
bna-r.1
for
106447369
bna-r.1
for
106451035
cit-r.1
for
102609577
gma-u.5
for
100809669
gma-u.5
for
100809547
vvi-u.5
for
100253362
ppo-u.5
for
18103861
mtr-u.5
for
25484110
sly-u.5
for
101265059
sot-r.1
for
102586102
nta-r.1
for
107783830
nta-r.1
for
107799701
osa-u.5
for
4332434
zma-u.5
for
100383335
tae-r.2
for
123092565
tae-r.2
for
123085481
tae-r.2
for
123097867
hvu-r.1
for
123448990
sbi-r.1
for
8081475
bdi-r.1
for
100822892
cre-r.1
for
CHLRE_16g694850v5


Ortholog ID: 7952
Species ghi ghi ath bra bra bna bna bna cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC107891029 LOC107889708 AT2G37500 LOC103867192 LOC103865603 LOC106447369 LOC106451035 LOC111215110 LOC102609577 LOC100809669 LOC100809547 LOC100253362 LOC18103861 LOC25484110 LOC101265059 LOC102586102 LOC107783830 LOC107799701 LOC4332434 LOC100383335 LOC123092565 LOC123085481 LOC123097867 LOC123448990 LOC8081475 LOC100822892 CHLRE_16g694850v5
Function* arginine biosynthesis bifunctional protein ArgJ, chloroplastic arginine biosynthesis bifunctional protein ArgJ, chloroplastic arginine biosynthesis protein ArgJ family arginine biosynthesis bifunctional protein ArgJ, chloroplastic arginine biosynthesis bifunctional protein ArgJ, chloroplastic arginine biosynthesis bifunctional protein ArgJ, chloroplastic arginine biosynthesis bifunctional protein ArgJ, chloroplastic arginine biosynthesis bifunctional protein ArgJ, chloroplastic-like arginine biosynthesis bifunctional protein ArgJ, chloroplastic arginine biosynthesis bifunctional protein ArgJ, chloroplastic arginine biosynthesis bifunctional protein ArgJ, chloroplastic arginine biosynthesis bifunctional protein ArgJ, chloroplastic-like arginine biosynthesis bifunctional protein ArgJ, chloroplastic arginine biosynthesis bifunctional protein ArgJ, chloroplastic arginine biosynthesis bifunctional protein ArgJ, chloroplastic arginine biosynthesis bifunctional protein ArgJ, chloroplastic arginine biosynthesis bifunctional protein ArgJ, chloroplastic arginine biosynthesis bifunctional protein ArgJ, chloroplastic arginine biosynthesis bifunctional protein ArgJ, chloroplastic-like Arginine biosynthesis bifunctional protein ArgJ, chloroplastic Glutamate N-acetyltransferase Amino-acid acetyltransferase Arginine biosynthesis bifunctional protein ArgJ alpha chain Arginine biosynthesis bifunctional protein ArgJ beta chain arginine biosynthesis bifunctional protein ArgJ, chloroplastic arginine biosynthesis bifunctional protein ArgJ, chloroplastic arginine biosynthesis bifunctional protein ArgJ, chloroplastic arginine biosynthesis bifunctional protein ArgJ, chloroplastic arginine biosynthesis bifunctional protein ArgJ, chloroplastic arginine biosynthesis bifunctional protein ArgJ, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00220 Arginine biosynthesis 2
ghi01210 2-Oxocarboxylic acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00220 Arginine biosynthesis 2
ghi01210 2-Oxocarboxylic acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 10
ath01210 2-Oxocarboxylic acid metabolism 4
ath00220 Arginine biosynthesis 3
ath00300 Lysine biosynthesis 3
ath00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 9
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00220 Arginine biosynthesis 4
bna01210 2-Oxocarboxylic acid metabolism 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00220 Arginine biosynthesis 4
bna01210 2-Oxocarboxylic acid metabolism 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00220 Arginine biosynthesis 4
bna01210 2-Oxocarboxylic acid metabolism 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma01230 Biosynthesis of amino acids 4
gma00220 Arginine biosynthesis 3
gma01210 2-Oxocarboxylic acid metabolism 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 7
gma00220 Arginine biosynthesis 5
gma01210 2-Oxocarboxylic acid metabolism 4
gma03010 Ribosome 2
gma03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00220 Arginine biosynthesis 3
vvi01230 Biosynthesis of amino acids 3
vvi03010 Ribosome 2
vvi01210 2-Oxocarboxylic acid metabolism 2
vvi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
mtr04141 Protein processing in endoplasmic reticulum 4
mtr00510 N-Glycan biosynthesis 3
mtr00513 Various types of N-glycan biosynthesis 3
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 6
sly01210 2-Oxocarboxylic acid metabolism 4
sly01240 Biosynthesis of cofactors 3
sly00220 Arginine biosynthesis 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 5
sot00061 Fatty acid biosynthesis 4
sot01212 Fatty acid metabolism 4
sot00620 Pyruvate metabolism 3
sot01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 5
nta00220 Arginine biosynthesis 4
nta01210 2-Oxocarboxylic acid metabolism 4
nta00230 Purine metabolism 2
nta00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 6
nta00220 Arginine biosynthesis 4
nta01210 2-Oxocarboxylic acid metabolism 4
nta00270 Cysteine and methionine metabolism 2
nta00470 D-Amino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 5
zma03010 Ribosome 4
zma03015 mRNA surveillance pathway 3
zma03018 RNA degradation 3
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 15
tae00220 Arginine biosynthesis 12
tae01210 2-Oxocarboxylic acid metabolism 6
tae00250 Alanine, aspartate and glutamate metabolism 6
tae00340 Histidine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 16
tae00220 Arginine biosynthesis 12
tae01210 2-Oxocarboxylic acid metabolism 6
tae00250 Alanine, aspartate and glutamate metabolism 6
tae00340 Histidine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 17
tae00220 Arginine biosynthesis 12
tae01210 2-Oxocarboxylic acid metabolism 6
tae00250 Alanine, aspartate and glutamate metabolism 6
tae00340 Histidine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 10
sbi04145 Phagosome 2
sbi00220 Arginine biosynthesis 2
sbi01210 2-Oxocarboxylic acid metabolism 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 6
bdi01200 Carbon metabolism 5
bdi00010 Glycolysis / Gluconeogenesis 3
bdi00350 Tyrosine metabolism 2
bdi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 10
cre00220 Arginine biosynthesis 8
cre01210 2-Oxocarboxylic acid metabolism 6
cre00250 Alanine, aspartate and glutamate metabolism 4
cre01200 Carbon metabolism 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107891029 107889708 818326 103867192 103865603 106447369 106451035 111215110 102609577 100809669 100809547 100253362 18103861 25484110 101265059 102586102 107783830 107799701 4332434 100383335 123092565 123085481 123097867 123448990 8081475 100822892 5724871
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