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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107891279   putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial 
 ghi-r.1   107891278   putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial 
 ghi-r.1   107889533   putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial 
 bra-r.6   103870097   putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial 
 cit-r.1   102609920   putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial 
 gma-u.5   100797551   putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial 
 vvi-u.5   104880111   putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial 
 mtr-u.5   11420782   putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial 
 sot-r.1   102599346   putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial 
 nta-r.1   107791993   putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial 
 nta-r.1   107770553   putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial 
 osa-u.5   4341523   putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial 
 zma-u.5   103638804   putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial 
 hvu-r.1   123410666   putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial 
 bdi-r.1   100824141   putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial 

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Top 50 coexpressed genes to 107891279 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107891279 (ghi-r.1 coexpression data)

CoexMap"107891279"


ghiLOC107891279 | Entrez gene ID : 107891279    
Species ghi bra cit gma vvi mtr sot nta osa zma hvu bdi sly tae bna ppo cre sbi ath
Paralog 3 1 1 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (557 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (14879 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_040956641.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 2,  nucl 1,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_040956641.1)
Subcellular
localization
TargetP
other 6  (predict for XP_040956641.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107891279
ghi-r.1
for
107891278
ghi-r.1
for
107889533
bra-r.6
for
103870097
cit-r.1
for
102609920
gma-u.5
for
100797551
vvi-u.5
for
104880111
mtr-u.5
for
11420782
sot-r.1
for
102599346
nta-r.1
for
107791993
nta-r.1
for
107770553
osa-u.5
for
4341523
zma-u.5
for
103638804
hvu-r.1
for
123410666
bdi-r.1
for
100824141


Ortholog ID: 11296
Species ghi ghi ghi bra cit gma vvi mtr sot nta nta osa zma hvu bdi
Symbol LOC107891279 LOC107891278 LOC107889533 LOC103870097 LOC102609920 LOC100797551 LOC104880111 LOC11420782 LOC102599346 LOC107791993 LOC107770553 LOC4341523 LOC103638804 LOC123410666 LOC100824141
Function* putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
ghi04517 IgSF CAM signaling 2
ghi04518 Integrin signaling 2
ghi04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
ghi04517 IgSF CAM signaling 2
ghi04518 Integrin signaling 2
ghi04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
ghi04517 IgSF CAM signaling 2
ghi04518 Integrin signaling 2
ghi04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107891279 107891278 107889533 103870097 102609920 100797551 104880111 11420782 102599346 107791993 107770553 4341523 103638804 123410666 100824141
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