ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107891795	uncharacterized aarF domain-containing protein kinase 2
ghi-r.1	107888991	uncharacterized aarF domain-containing protein kinase 2
ghi-r.1	107920753	probable serine/threonine-protein kinase abkC
ghi-r.1	107937778	probable serine/threonine-protein kinase abkC
ath-u.5	AT1G11390	Protein kinase superfamily protein
bra-r.6	103871897	probable serine/threonine-protein kinase abkC
bra-r.6	103843241	uncharacterized aarF domain-containing protein kinase 2
bna-r.1	106416160	uncharacterized aarF domain-containing protein kinase 2
bna-r.1	106416073	uncharacterized aarF domain-containing protein kinase 2
bna-r.1	106389445	probable serine/threonine-protein kinase abkC
cit-r.1	102607989	uncharacterized LOC102607989
gma-u.5	100819724	probable serine/threonine-protein kinase abkC
gma-u.5	100807245	probable serine/threonine-protein kinase abkC
gma-u.5	100802483	probable serine/threonine-protein kinase abkC
vvi-u.5	100244896	uncharacterized LOC100244896
ppo-u.5	7494329	uncharacterized LOC7494329
ppo-u.5	7496996	uncharacterized LOC7496996
mtr-u.5	11429523	probable serine/threonine-protein kinase abkC
mtr-u.5	25485915	ABC1 family protein YPL109C, mitochondrial
mtr-u.5	25502578	uncharacterized aarF domain-containing protein kinase 2
sly-u.5	101264593	uncharacterized LOC101264593
sly-u.5	101251736	uncharacterized LOC101251736
sly-u.5	101246766	uncharacterized LOC101246766
sot-r.1	102589091	probable serine/threonine-protein kinase abkC
sot-r.1	102578830	probable serine/threonine-protein kinase abkC
sot-r.1	102582356	probable serine/threonine-protein kinase abkC
nta-r.1	107809689	uncharacterized LOC107809689
nta-r.1	107809323	uncharacterized LOC107809323
nta-r.1	107808754	uncharacterized LOC107808754
osa-u.5	4343579	uncharacterized LOC4343579
osa-u.5	4337281	uncharacterized LOC4337281
zma-u.5	100285244	protein kinase-like
zma-u.5	100279203	putative ABC1 and kinase-like domain family protein
tae-r.2	123046998	probable serine/threonine-protein kinase abkC
tae-r.2	123044557	probable serine/threonine-protein kinase abkC
tae-r.2	123190674	probable serine/threonine-protein kinase abkC
hvu-r.1	123425715	probable serine/threonine-protein kinase abkC
hvu-r.1	123428053	probable serine/threonine-protein kinase abkC
sbi-r.1	110432846	ABC1 family protein YPL109C, mitochondrial-like
sbi-r.1	8070268	probable serine/threonine-protein kinase abkC
bdi-r.1	100846561	probable serine/threonine-protein kinase abkC
bdi-r.1	100845973	probable serine/threonine-protein kinase abkC
cre-r.1	CHLRE_10g430800v5	uncharacterized protein
cre-r.1	CHLRE_01g031900v5	uncharacterized protein

Top 50 coexpressed genes to 107891795 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107891795 (ghi-r.1 coexpression data)

CoexMap"107891795"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_016672197.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, mito 3, nucl 1, cyto 1, plas 1, golg 1, cyto_nucl 1, nucl_plas 1, golg_plas 1, cyto_plas 1

(predict for XP_016672197.2)

Subcellular
localization
TargetP

mito 7, other 3

(predict for XP_016672197.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107891795	ghi-r.1 for 107888991	ghi-r.1 for 107920753	ghi-r.1 for 107937778	ath-u.5 for AT1G11390	bra-r.6 for 103871897	bra-r.6 for 103843241	bna-r.1 for 106416160	bna-r.1 for 106416073	bna-r.1 for 106389445	cit-r.1 for 102607989	gma-u.5 for 100819724	gma-u.5 for 100807245	gma-u.5 for 100802483	vvi-u.5 for 100244896	ppo-u.5 for 7494329	ppo-u.5 for 7496996	mtr-u.5 for 11429523	mtr-u.5 for 25485915	mtr-u.5 for 25502578	sly-u.5 for 101264593	sly-u.5 for 101251736	sly-u.5 for 101246766	sot-r.1 for 102589091	sot-r.1 for 102578830	sot-r.1 for 102582356	nta-r.1 for 107809689	nta-r.1 for 107809323	nta-r.1 for 107808754	osa-u.5 for 4343579	osa-u.5 for 4337281	zma-u.5 for 100285244	zma-u.5 for 100279203	tae-r.2 for 123046998	tae-r.2 for 123044557	tae-r.2 for 123190674	hvu-r.1 for 123425715	hvu-r.1 for 123428053	sbi-r.1 for 110432846	sbi-r.1 for 8070268	bdi-r.1 for 100846561	bdi-r.1 for 100845973	cre-r.1 for CHLRE_10g430800v5	cre-r.1 for CHLRE_01g031900v5

Ortholog

Ortholog ID: 2949

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized aarF domain-containing protein kinase 2

probable serine/threonine-protein kinase abkC

Protein kinase superfamily protein

probable serine/threonine-protein kinase abkC

uncharacterized aarF domain-containing protein kinase 2

probable serine/threonine-protein kinase abkC

uncharacterized LOC102607989

probable serine/threonine-protein kinase abkC

uncharacterized LOC100244896

uncharacterized LOC7494329

uncharacterized LOC7496996

probable serine/threonine-protein kinase abkC

ABC1 family protein YPL109C, mitochondrial

uncharacterized aarF domain-containing protein kinase 2

uncharacterized LOC101264593

uncharacterized LOC101251736

uncharacterized LOC101246766

probable serine/threonine-protein kinase abkC

uncharacterized LOC107809689

uncharacterized LOC107809323

uncharacterized LOC107802541

uncharacterized LOC4343579

uncharacterized LOC4337281

protein kinase-like

putative ABC1 and kinase-like domain family protein

probable serine/threonine-protein kinase abkC

ABC1 family protein YPL109C, mitochondrial-like

probable serine/threonine-protein kinase abkC

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	2
ghi00510	N-Glycan biosynthesis	2
ghi00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	2
bra00450	Selenocompound metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03015	mRNA surveillance pathway	5
bna03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01232	Nucleotide metabolism	3
gma00230	Purine metabolism	2
gma00730	Thiamine metabolism	2
gma01240	Biosynthesis of cofactors	2
gma00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00270	Cysteine and methionine metabolism	2
vvi01200	Carbon metabolism	2
vvi01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03013	Nucleocytoplasmic transport	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	3
mtr00561	Glycerolipid metabolism	3
mtr03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03050	Proteasome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00999	Biosynthesis of various plant secondary metabolites	3
sly04712	Circadian rhythm - plant	2
sly03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04142	Lysosome	3
sot04144	Endocytosis	3
sot05100	Bacterial invasion of epithelial cells	3
sot04141	Protein processing in endoplasmic reticulum	2
sot00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00514	Other types of O-glycan biosynthesis	2
nta04142	Lysosome	2
nta04144	Endocytosis	2
nta05100	Bacterial invasion of epithelial cells	2
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03008	Ribosome biogenesis in eukaryotes	3
zma00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	3
zma04626	Plant-pathogen interaction	3
zma04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03015	mRNA surveillance pathway	2
sbi00240	Pyrimidine metabolism	2
sbi01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04712	Circadian rhythm - plant	3

Expression

Expression pattern

Entrez Gene ID^*

107891795

107888991

107925258

837681

103871897

103843241

106416160

106416073

106389445

102607989

100819724

100807245

100795543

100244896

7494329

7496996

11429523

25485915

25502578

101264593

101251736

101246766

102589091

102578830

102582356

107809689

107809323

107802541

4343579

4337281

100285244

100279203

123046998

123052385

123188275

123425715

123428053

110432846

8070268

100846561

100845973

5728086

5715392

The preparation time of this page was 0.2 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	1	2	3	1	3	1	2	3	3	3	3	2	2	3	2	2	2	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107891795 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107891795 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**