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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107892003   ultraviolet-B receptor UVR8 
 ath-u.5   AT3G02300   Regulator of chromosome condensation (RCC1) family protein 
 gma-u.5   100789484   ultraviolet-B receptor UVR8 
 gma-u.5   100787126   ultraviolet-B receptor UVR8 
 vvi-u.5   100254890   ultraviolet-B receptor UVR8 
 ppo-u.5   18107346   uncharacterized LOC18107346 
 mtr-u.5   11430315   probable E3 ubiquitin-protein ligase HERC4 
 sly-u.5   101251346   ultraviolet-B receptor UVR8 
 osa-u.5   9267822   ultraviolet-B receptor UVR8 
 zma-u.5   100304276   putative regulator of chromosome condensation (RCC1) family protein 

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Top 50 coexpressed genes to 107892003 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107892003 (ghi-r.1 coexpression data)

CoexMap"107892003"


ghiLOC107892003 | Entrez gene ID : 107892003    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_016672445.1 [sequence] [blastp]
XP_016672446.1 [sequence] [blastp]
XP_016672448.1 [sequence] [blastp]
XP_040937260.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 1,  cyto 1  (predict for XP_016672445.1)
nucl 6,  chlo 1,  cyto 1  (predict for XP_016672446.1)
nucl 6,  cyto 2,  chlo 1  (predict for XP_016672448.1)
nucl 6,  chlo 1,  cyto 1  (predict for XP_040937260.1)
Subcellular
localization
TargetP
other 9  (predict for XP_016672445.1)
other 9  (predict for XP_016672446.1)
other 9  (predict for XP_016672448.1)
other 9  (predict for XP_040937260.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107892003
ath-u.5
for
AT3G02300
gma-u.5
for
100789484
gma-u.5
for
100787126
vvi-u.5
for
100254890
ppo-u.5
for
18107346
mtr-u.5
for
11430315
sly-u.5
for
101251346
osa-u.5
for
9267822
zma-u.5
for
100304276


Ortholog ID: 11312
Species ghi ghi ath bra bna bna cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC107892003 LOC107901432 AT3G02300 LOC103870920 LOC106382856 LOC106382871 LOC102616029 LOC100787126 LOC100789484 LOC100254890 LOC18107346 LOC11430315 LOC101251346 LOC102601190 LOC107789628 LOC107767795 LOC9267822 LOC100304276 LOC123120974 LOC123111606 LOC123395053 LOC8064524 LOC100838871
Function* ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 Regulator of chromosome condensation (RCC1) family protein RCC1 and BTB domain-containing protein 1 RCC1 and BTB domain-containing protein 1-like RCC1 and BTB domain-containing protein 1 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 uncharacterized LOC18107346 probable E3 ubiquitin-protein ligase HERC4 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 putative regulator of chromosome condensation (RCC1) family protein RCC1 domain-containing protein RUG3, mitochondrial RCC1 and BTB domain-containing protein 1 RCC1 and BTB domain-containing protein 1 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 8
bra00630 Glyoxylate and dicarboxylate metabolism 6
bra00260 Glycine, serine and threonine metabolism 4
bra01230 Biosynthesis of amino acids 4
bra00380 Tryptophan metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma00020 Citrate cycle (TCA cycle) 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma01200 Carbon metabolism 2
gma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 6
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 12
ppo04626 Plant-pathogen interaction 2
ppo03040 Spliceosome 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
sot01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma04120 Ubiquitin mediated proteolysis 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae00561 Glycerolipid metabolism 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 3
sbi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107892003 107901432 821167 103870920 106382856 106382871 102616029 100787126 100789484 100254890 18107346 11430315 101251346 102601190 107789628 107767795 9267822 100304276 123120974 123111606 123395053 8064524 100838871
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