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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107892300   pentatricopeptide repeat-containing protein At1g33350 
 ghi-r.1   107888653   pentatricopeptide repeat-containing protein At1g33350 
 ath-u.5   AT1G33350   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103840067   pentatricopeptide repeat-containing protein At1g33350 
 cit-r.1   102630851   pentatricopeptide repeat-containing protein At1g33350 
 gma-u.5   100806937   pentatricopeptide repeat-containing protein At1g33350 
 vvi-u.5   100243058   pentatricopeptide repeat-containing protein At1g33350 
 mtr-u.5   11440689   pentatricopeptide repeat-containing protein At1g33350 
 sot-r.1   102604700   pentatricopeptide repeat-containing protein At1g33350 
 nta-r.1   107815748   pentatricopeptide repeat-containing protein At1g33350-like 
 nta-r.1   107816437   pentatricopeptide repeat-containing protein At1g33350-like 
 osa-u.5   4330009   pentatricopeptide repeat-containing protein At1g33350 
 zma-u.5   103627426   pentatricopeptide repeat-containing protein At1g33350 
 sbi-r.1   8072486   pentatricopeptide repeat-containing protein At1g33350 
 bdi-r.1   100833300   pentatricopeptide repeat-containing protein At1g33350 

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Top 50 coexpressed genes to 107892300 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107892300 (ghi-r.1 coexpression data)

CoexMap"107892300"


ghiLOC107892300 | Entrez gene ID : 107892300    
Species ghi ath bra cit gma vvi mtr sot nta osa zma sbi bdi sly tae bna ppo cre hvu
Paralog 2 1 1 1 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (557 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (14879 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016672823.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  extr 1,  cysk 1,  cysk_nucl 1  (predict for XP_016672823.1)
Subcellular
localization
TargetP
other 6,  scret 5  (predict for XP_016672823.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107892300
ghi-r.1
for
107888653
ath-u.5
for
AT1G33350
bra-r.6
for
103840067
cit-r.1
for
102630851
gma-u.5
for
100806937
vvi-u.5
for
100243058
mtr-u.5
for
11440689
sot-r.1
for
102604700
nta-r.1
for
107815748
nta-r.1
for
107816437
osa-u.5
for
4330009
zma-u.5
for
103627426
sbi-r.1
for
8072486
bdi-r.1
for
100833300


Ortholog ID: 12036
Species ghi ghi ath bra cit gma vvi mtr sot nta nta osa zma sbi bdi
Symbol LOC107892300 LOC107888653 AT1G33350 LOC103840067 LOC102630851 LOC100806937 LOC100243058 LOC11440689 LOC102604700 LOC107815748 LOC107816437 LOC4330009 LOC103627426 LOC8072486 LOC100833300
Function* pentatricopeptide repeat-containing protein At1g33350 pentatricopeptide repeat-containing protein At1g33350 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g33350 pentatricopeptide repeat-containing protein At1g33350 pentatricopeptide repeat-containing protein At1g33350 pentatricopeptide repeat-containing protein At1g33350 pentatricopeptide repeat-containing protein At1g33350 pentatricopeptide repeat-containing protein At1g33350 pentatricopeptide repeat-containing protein At1g33350-like pentatricopeptide repeat-containing protein At1g33350-like pentatricopeptide repeat-containing protein At1g33350 pentatricopeptide repeat-containing protein At1g33350 pentatricopeptide repeat-containing protein At1g33350 pentatricopeptide repeat-containing protein At1g33350
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00230 Purine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107892300 107888653 840229 103840067 102630851 100806937 100243058 11440689 102604700 107815748 107816437 4330009 103627426 8072486 100833300
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