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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107893221   60S ribosomal protein L2, mitochondrial 
 ghi-r.1   107920021   60S ribosomal protein L2, mitochondrial 
 ath-u.5   AT2G44065   Ribosomal protein L2 family 
 bra-r.6   108871339   60S ribosomal protein L2, mitochondrial 
 bra-r.6   108872058   60S ribosomal protein L2, mitochondrial 
 bna-r.1   125606877   60S ribosomal protein L2, mitochondrial-like 
 bna-r.1   106390331   60S ribosomal protein L2, mitochondrial 
 bna-r.1   106390677   60S ribosomal protein L2, mitochondrial 
 cit-r.1   102625872   60S ribosomal protein L2, mitochondrial 
 gma-u.5   100792418   60S ribosomal protein L2, mitochondrial-like 
 gma-u.5   100527286   60S ribosomal protein L2-like 
 vvi-u.5   100266379   large ribosomal subunit protein uL2m 
 ppo-u.5   18100829   60S ribosomal protein L2, mitochondrial 
 ppo-u.5   18106750   60S ribosomal protein L2, mitochondrial 
 mtr-u.5   11441286   60S ribosomal protein L2, mitochondrial 
 sot-r.1   102579158   60S ribosomal protein L2, mitochondrial 
 nta-r.1   107812987   large ribosomal subunit protein uL2my, C-terminal part-like 
 nta-r.1   107761318   60S ribosomal protein L2, mitochondrial-like 
 zma-u.5   542547   50S ribosomal protein L2, mitochondrial-like 
 tae-r.2   780602   60S ribosomal protein L2, mitochondrial 
 tae-r.2   780603   60S ribosomal protein L2, mitochondrial 
 tae-r.2   123104286   60S ribosomal protein L2, mitochondrial 
 hvu-r.1   123439131   60S ribosomal protein L2, mitochondrial-like 
 hvu-r.1   123427365   60S ribosomal protein L2, mitochondrial-like 
 sbi-r.1   8063825   60S ribosomal protein L2, mitochondrial 
 cre-r.1   CHLRE_07g348850v5   uncharacterized protein 

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Top 50 coexpressed genes to 107893221 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107893221 (ghi-r.1 coexpression data)

CoexMap"107893221"


ghiLOC107893221 | Entrez gene ID : 107893221    
Species ghi ath bra bna cit gma vvi ppo mtr sot nta zma tae hvu sbi cre bdi sly osa
Paralog 2 1 2 3 1 2 1 2 1 1 2 1 3 2 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032543 [list] [network] mitochondrial translation  (58 genes)  IEA  
GO CC
GO:0005762 [list] [network] mitochondrial large ribosomal subunit  (54 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
Protein XP_016673649.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo 4  (predict for XP_016673649.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_016673649.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107893221
ghi-r.1
for
107920021
ath-u.5
for
AT2G44065
bra-r.6
for
108871339
bra-r.6
for
108872058
bna-r.1
for
125606877
bna-r.1
for
106390331
bna-r.1
for
106390677
cit-r.1
for
102625872
gma-u.5
for
100792418
gma-u.5
for
100527286
vvi-u.5
for
100266379
ppo-u.5
for
18100829
ppo-u.5
for
18106750
mtr-u.5
for
11441286
sot-r.1
for
102579158
nta-r.1
for
107812987
nta-r.1
for
107761318
zma-u.5
for
542547
tae-r.2
for
780602
tae-r.2
for
780603
tae-r.2
for
123104286
hvu-r.1
for
123439131
hvu-r.1
for
123427365
sbi-r.1
for
8063825
cre-r.1
for
CHLRE_07g348850v5


Ortholog ID: 7552
Species ghi ghi ath bra bra bna bna bna cit gma gma vvi ppo ppo mtr sot nta nta zma tae tae tae hvu hvu sbi cre
Symbol LOC107893221 LOC107920021 AT2G44065 LOC108871339 LOC108872058 LOC106390331 LOC106394183 LOC106438207 LOC102625872 LOC100792418 LOC100527286 LOC100266379 LOC18100829 LOC18106750 LOC11441286 LOC102579158 LOC107812987 LOC107761318 LOC542547 LOC780602 LOC123104286 LOC123143961 LOC123439131 LOC123427365 LOC8063825 CHLRE_07g348850v5
Function* 60S ribosomal protein L2, mitochondrial 60S ribosomal protein L2, mitochondrial Ribosomal protein L2 family 60S ribosomal protein L2, mitochondrial 60S ribosomal protein L2, mitochondrial 60S ribosomal protein L2, mitochondrial 60S ribosomal protein L2, mitochondrial-like 60S ribosomal protein L2, mitochondrial-like 60S ribosomal protein L2, mitochondrial 60S ribosomal protein L2, mitochondrial-like 60S ribosomal protein L2-like large ribosomal subunit protein uL2m 60S ribosomal protein L2, mitochondrial 60S ribosomal protein L2, mitochondrial 60S ribosomal protein L2, mitochondrial 60S ribosomal protein L2, mitochondrial large ribosomal subunit protein uL2my, C-terminal part-like 60S ribosomal protein L2, mitochondrial-like 50S ribosomal protein L2, mitochondrial-like 60S ribosomal protein L2, mitochondrial 60S ribosomal protein L2, mitochondrial 60S ribosomal protein L2, mitochondrial 60S ribosomal protein L2, mitochondrial-like 60S ribosomal protein L2, mitochondrial-like 60S ribosomal protein L2, mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 5
ath03010 Ribosome 3
ath00230 Purine metabolism 2
ath01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
cit00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 13
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 8
ppo00270 Cysteine and methionine metabolism 7
ppo00670 One carbon pool by folate 5
ppo01240 Biosynthesis of cofactors 4
ppo01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta04626 Plant-pathogen interaction 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
nta04141 Protein processing in endoplasmic reticulum 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 4
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 5
sbi03010 Ribosome 3
sbi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107893221 107920021 819012 108871339 108872058 106390331 106394183 106438207 102625872 100792418 100527286 100266379 18100829 18106750 11441286 102579158 107812987 107761318 542547 780602 123104286 123143961 123439131 123427365 8063825 5718162
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