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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107893279   40S ribosomal protein S27-2 
 ath-u.5   AT2G45710   Zinc-binding ribosomal protein family protein 
 ath-u.5   RS27A   ribosomal protein S27 
 ath-u.5   AT5G47930   Zinc-binding ribosomal protein family protein 
 gma-u.5   100776354   40S ribosomal protein S27-2 
 gma-u.5   100306318   40S ribosomal protein S27 
 gma-u.5   100809054   40S ribosomal protein S27-2 
 vvi-u.5   100248991   40S ribosomal protein S27-2-like 
 vvi-u.5   100248037   small ribosomal subunit protein eS27y 
 ppo-u.5   7491442   40S ribosomal protein S27-2 
 ppo-u.5   7496522   40S ribosomal protein S27-2 
 ppo-u.5   18100591   40S ribosomal protein S27-2 
 mtr-u.5   25485569   40S ribosomal protein S27-2 
 mtr-u.5   25486284   40S ribosomal protein S27-2 
 mtr-u.5   11446844   40S ribosomal protein S27-2 
 sly-u.5   101252403   small ribosomal subunit protein eS27z-like 
 sly-u.5   101247355   small ribosomal subunit protein eS27y 
 osa-u.5   107277301   small ribosomal subunit protein eS27 
 osa-u.5   4335531   40S ribosomal protein S27 
 osa-u.5   4329362   small ribosomal subunit protein eS27 
 zma-u.5   103627157   40S ribosomal protein S27 
 zma-u.5   103625888   40S ribosomal protein S27 
 zma-u.5   542617   ribosomal protein S27 

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Top 50 coexpressed genes to 107893279 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107893279 (ghi-r.1 coexpression data)

CoexMap"107893279"


ghiLOC107893279 | Entrez gene ID : 107893279    
Species ghi ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna
Paralog 1 3 3 2 3 3 2 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0000028 [list] [network] ribosomal small subunit assembly  (100 genes)  IEA  
GO:0006412 [list] [network] translation  (1487 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (268 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
Protein XP_016673709.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  mito 1,  extr 1  (predict for XP_016673709.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016673709.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107893279

.
ath-u.5
for
AT2G45710

.
ath-u.5
for
RS27A

.
ath-u.5
for
AT5G47930

.
gma-u.5
for
100776354

.
gma-u.5
for
100306318

.
gma-u.5
for
100809054

.
vvi-u.5
for
100248991

.
vvi-u.5
for
100248037

.
ppo-u.5
for
7491442

.
ppo-u.5
for
7496522

.
ppo-u.5
for
18100591

.
mtr-u.5
for
25485569

.
mtr-u.5
for
25486284

.
mtr-u.5
for
11446844

.
sly-u.5
for
101252403

.
sly-u.5
for
101247355

.
osa-u.5
for
107277301

.
osa-u.5
for
4335531

.
osa-u.5
for
4329362

.
zma-u.5
for
103627157

.
zma-u.5
for
103625888

.
zma-u.5
for
542617

.


Ortholog ID: 1124
Species ath gma gma sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre cre sbi sbi sot cit cit bdi bdi nta nta
Symbol AT5G47930 LOC100499804 LOC100809054 LOC101252403 LOC4329362 LOC4335531 LOC103627157 LOC542617 LOC103830282 LOC103858186 LOC100248991 LOC100248037 LOC7496522 LOC18100591 LOC25485569 LOC11446844 LOC123093263 LOC123084822 LOC123449528 LOC123407554 LOC121232136 LOC107893279 LOC106428973 LOC106415163 CHLRE_12g529400v5 CHLRE_02g145250v5 LOC8084522 LOC8060477 LOC102600252 LOC127898633 LOC102608679 LOC100843921 LOC100839931 LOC107784453 LOC107808170
Function* Zinc-binding ribosomal protein family protein uncharacterized LOC100499804 40S ribosomal protein S27-2 small ribosomal subunit protein eS27z-like small ribosomal subunit protein eS27 40S ribosomal protein S27 40S ribosomal protein S27 ribosomal protein S27 40S ribosomal protein S27-2 40S ribosomal protein S27-2 40S ribosomal protein S27-2-like small ribosomal subunit protein eS27y 40S ribosomal protein S27-2 40S ribosomal protein S27-2 40S ribosomal protein S27-2 40S ribosomal protein S27-2 40S ribosomal protein S27 40S ribosomal protein S27 40S ribosomal protein S27 40S ribosomal protein S27 40S ribosomal protein S27-2 40S ribosomal protein S27-2 40S ribosomal protein S27-2 40S ribosomal protein S27-2 ribosomal protein S27 isoform A ribosomal protein S27 isoform B 40S ribosomal protein S27 40S ribosomal protein S27 40S ribosomal protein S27-2 40S ribosomal protein S27-2 40S ribosomal protein S27-2 40S ribosomal protein S27 40S ribosomal protein S27 small ribosomal subunit protein eS27y small ribosomal subunit protein eS27y
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
gma03040 Spliceosome 3
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
bra03008 Ribosome biogenesis in eukaryotes 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 10
tae03008 Ribosome biogenesis in eukaryotes 4
tae03018 RNA degradation 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 13
tae03018 RNA degradation 3
tae03040 Spliceosome 3
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 13
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
ghi04120 Ubiquitin mediated proteolysis 4
ghi04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834844 100499804 100809054 101252403 4329362 4335531 103627157 542617 103830282 103858186 100248991 100248037 7496522 18100591 25485569 11446844 123093263 123084822 123449528 123407554 121232136 107893279 106428973 106415163 5722425 5720499 8084522 8060477 102600252 127898633 102608679 100843921 100839931 107784453 107808170
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