ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107893445	uncharacterized LOC107893445
ghi-r.1	107908750	uncharacterized LOC107908750
ghi-r.1	107907333	uncharacterized LOC107907333
ath-u.5	AT1G15350	DUF4050 family protein
ath-u.5	AT5G25360	uncharacterized protein
bra-r.6	103841393	uncharacterized LOC103841393
bra-r.6	103874397	uncharacterized LOC103874397
bra-r.6	103836032	uncharacterized LOC103836032
bna-r.1	BNAA09G34710D	uncharacterized BNAA09G34710D
bna-r.1	106382302	uncharacterized LOC106382302
cit-r.1	102606763	uncharacterized LOC102606763
cit-r.1	102615251	hypothetical protein
cit-r.1	102620837	hypothetical protein
gma-u.5	100306038	uncharacterized LOC100306038
gma-u.5	100306573	uncharacterized LOC100306573
gma-u.5	100499770	uncharacterized LOC100499770
vvi-u.5	100245670	uncharacterized LOC100245670
vvi-u.5	100854479	uncharacterized LOC100854479
vvi-u.5	100254371	uncharacterized LOC100254371
ppo-u.5	7471591	uncharacterized LOC7471591
ppo-u.5	7463456	uncharacterized LOC7463456
ppo-u.5	7464931	uncharacterized LOC7464931
mtr-u.5	11436056	uncharacterized LOC11436056
mtr-u.5	11429345	uncharacterized LOC11429345
sly-u.5	101258679	uncharacterized LOC101258679
sly-u.5	104644301	uncharacterized LOC104644301
sly-u.5	101261629	uncharacterized LOC101261629
sot-r.1	102578862	uncharacterized LOC102578862
sot-r.1	102587303	uncharacterized LOC102587303
nta-r.1	107830393	uncharacterized LOC107830393
nta-r.1	107763202	uncharacterized LOC107763202
nta-r.1	107785432	uncharacterized LOC107785432
osa-u.5	4343229	uncharacterized LOC4343229
osa-u.5	4327646	uncharacterized LOC4327646
osa-u.5	4328648	uncharacterized LOC4328648
zma-u.5	100277310	uncharacterized LOC100277310
zma-u.5	100277194	DUF4050 family protein
zma-u.5	100275083	uncharacterized LOC100275083
tae-r.2	123077629	uncharacterized LOC123077629
tae-r.2	123069110	uncharacterized LOC123069110
tae-r.2	123060547	uncharacterized LOC123060547
hvu-r.1	123411192	uncharacterized LOC123411192
hvu-r.1	123443053	uncharacterized LOC123443053
hvu-r.1	123402253	uncharacterized LOC123402253
sbi-r.1	8056548	uncharacterized LOC8056548
sbi-r.1	8080675	uncharacterized LOC8080675
sbi-r.1	8082918	uncharacterized LOC8082918
bdi-r.1	100834614	uncharacterized LOC100834614
bdi-r.1	100828365	uncharacterized LOC100828365
bdi-r.1	100833399	uncharacterized LOC100833399
cre-r.1	CHLRE_11g482626v5	uncharacterized protein

Top 50 coexpressed genes to 107893445 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107893445 (ghi-r.1 coexpression data)

CoexMap"107893445"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_040941525.1 [sequence] [blastp]
XP_040941526.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 7, extr 2	(predict for XP_040941525.1)
chlo 7, extr 2	(predict for XP_040941526.1)

Subcellular
localization
TargetP

chlo 1	(predict for XP_040941525.1)
chlo 1	(predict for XP_040941526.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107893445	ghi-r.1 for 107908750	ghi-r.1 for 107907333	ath-u.5 for AT1G15350	ath-u.5 for AT5G25360	bra-r.6 for 103841393	bra-r.6 for 103874397	bra-r.6 for 103836032	bna-r.1 for BNAA09G34710D	bna-r.1 for 106382302	cit-r.1 for 102606763	cit-r.1 for 102615251	cit-r.1 for 102620837	gma-u.5 for 100306038	gma-u.5 for 100306573	gma-u.5 for 100499770	vvi-u.5 for 100245670	vvi-u.5 for 100854479	vvi-u.5 for 100254371	ppo-u.5 for 7471591	ppo-u.5 for 7463456	ppo-u.5 for 7464931	mtr-u.5 for 11436056	mtr-u.5 for 11429345	sly-u.5 for 101258679	sly-u.5 for 104644301	sly-u.5 for 101261629	sot-r.1 for 102578862	sot-r.1 for 102587303	nta-r.1 for 107830393	nta-r.1 for 107763202	nta-r.1 for 107785432	osa-u.5 for 4343229	osa-u.5 for 4327646	osa-u.5 for 4328648	zma-u.5 for 100277310	zma-u.5 for 100277194	zma-u.5 for 100275083	tae-r.2 for 123077629	tae-r.2 for 123069110	tae-r.2 for 123060547	hvu-r.1 for 123411192	hvu-r.1 for 123443053	hvu-r.1 for 123402253	sbi-r.1 for 8056548	sbi-r.1 for 8080675	sbi-r.1 for 8082918	bdi-r.1 for 100834614	bdi-r.1 for 100828365	bdi-r.1 for 100833399	cre-r.1 for CHLRE_11g482626v5

Ortholog

Ortholog ID: 545

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC107907333

uncharacterized LOC107888413

uncharacterized LOC107915799

zinc finger protein

uncharacterized protein

uncharacterized LOC103874397

uncharacterized LOC103872326

uncharacterized LOC103842908

uncharacterized BNAA09G34710D

uncharacterized LOC106382642

uncharacterized BNAC08G25670D

uncharacterized LOC102606763

hypothetical protein

uncharacterized LOC100796170

uncharacterized LOC100812832

uncharacterized LOC100254371

uncharacterized LOC100250951

uncharacterized LOC100854399

uncharacterized LOC7470097

uncharacterized LOC7494931

uncharacterized LOC7485472

uncharacterized LOC11436056

uncharacterized LOC11435981

uncharacterized LOC25484919

uncharacterized LOC101261629

uncharacterized LOC101263220

uncharacterized LOC101253173

uncharacterized LOC102596461

uncharacterized LOC107058297

uncharacterized LOC107763202

uncharacterized LOC107797262

uncharacterized LOC107813636

uncharacterized LOC4343229

uncharacterized LOC4327646

uncharacterized LOC4328648

uncharacterized LOC100277310

uncharacterized LOC118476413

uncharacterized LOC103633165

uncharacterized LOC123060547

uncharacterized LOC123148184

uncharacterized LOC123168413

uncharacterized LOC123411192

uncharacterized LOC123443053

uncharacterized LOC123402253

uncharacterized LOC8056548

uncharacterized LOC8080675

uncharacterized LOC110430931

uncharacterized LOC100834614

uncharacterized LOC100833399

uncharacterized LOC100839071

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2
ghi00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	2
ath04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00564	Glycerophospholipid metabolism	4
bna00052	Galactose metabolism	4
bna04517	IgSF CAM signaling	2
bna04814	Motor proteins	2
bna00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00052	Galactose metabolism	4
bna00564	Glycerophospholipid metabolism	2
bna04517	IgSF CAM signaling	2
bna04814	Motor proteins	2
bna00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04130	SNARE interactions in vesicular transport	4
gma04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00230	Purine metabolism	2
vvi01232	Nucleotide metabolism	2
vvi04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00520	Amino sugar and nucleotide sugar metabolism	2
vvi01250	Biosynthesis of nucleotide sugars	2
vvi04144	Endocytosis	2
vvi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	3
sly04136	Autophagy - other	2
sly04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00500	Starch and sucrose metabolism	7
sot00520	Amino sugar and nucleotide sugar metabolism	2
sot01250	Biosynthesis of nucleotide sugars	2
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	2
nta03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	4
zma04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00600	Sphingolipid metabolism	2
zma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03015	mRNA surveillance pathway	3
tae04136	Autophagy - other	3
tae04382	Cornified envelope formation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03015	mRNA surveillance pathway	3
tae04136	Autophagy - other	3
tae04382	Cornified envelope formation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre01240	Biosynthesis of cofactors	2

Expression

Expression pattern

Entrez Gene ID^*

107907333

107888413

107915799

824653

820820

103874397

103872326

103842908

106411801

106382642

106402602

102606763

102615251

102620837

100796170

100812832

100254371

100250951

100854399

7470097

7494931

7485472

11436056

11435981

25484919

101261629

101263220

101253173

102596461

107058297

107763202

107797262

107813636

4343229

4327646

4328648

100277310

118476413

103633165

123060547

123148184

123168413

123411192

123443053

123402253

8056548

8080675

110430931

100834614

100833399

100839071

66055375

The preparation time of this page was 0.2 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	2	3	2	3	3	3	3	2	3	2	3	3	3	3	3	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107893445 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107893445 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**