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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107893657   40S ribosomal protein S12-2 
 ghi-r.1   107888433   40S ribosomal protein S12-2 
 ghi-r.1   107893427   40S ribosomal protein S12-2 
 ghi-r.1   107901582   40S ribosomal protein S12 
 ath-u.5   AT2G32060   Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 
 ath-u.5   AT1G15930   Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 
 bra-r.6   103865180   40S ribosomal protein S12-1 
 bra-r.6   103867690   40S ribosomal protein S12-1 
 bra-r.6   103872393   40S ribosomal protein S12-1 
 bna-r.1   106390173   40S ribosomal protein S12-1 
 bna-r.1   106399323   40S ribosomal protein S12-1 
 bna-r.1   106346799   40S ribosomal protein S12-1 
 cit-r.1   102613535   40S ribosomal protein S12 
 gma-u.5   100499723   uncharacterized LOC100499723 
 gma-u.5   100500093   uncharacterized LOC100500093 
 gma-u.5   100786733   40S ribosomal protein S12 
 vvi-u.5   100255187   small ribosomal subunit protein eS12 
 vvi-u.5   100265590   small ribosomal subunit protein eS12 
 ppo-u.5   7464817   40S ribosomal protein S12 
 ppo-u.5   7468719   40S ribosomal protein S12 
 ppo-u.5   7493221   40S ribosomal protein S12 
 mtr-u.5   11436487   40S ribosomal protein S12-2 
 mtr-u.5   11436771   40S ribosomal protein S12 
 mtr-u.5   11433925   40S ribosomal protein S12 
 sly-u.5   101247070   small ribosomal subunit protein eS12 
 sly-u.5   101256955   small ribosomal subunit protein eS12 
 sly-u.5   101257841   small ribosomal subunit protein eS12 
 sot-r.1   102603178   40S ribosomal protein S12-like 
 sot-r.1   102582055   40S ribosomal protein S12-like 
 sot-r.1   102598170   40S ribosomal protein S12-like 
 nta-r.1   107771517   small ribosomal subunit protein eS12 
 nta-r.1   107822385   small ribosomal subunit protein eS12-like 
 nta-r.1   107807381   small ribosomal subunit protein eS12-like 
 osa-u.5   4342408   small ribosomal subunit protein eS12 
 osa-u.5   4342771   40S ribosomal protein S12 
 zma-u.5   100282880   ribosomal proteinS12 (homolog) 
 zma-u.5   100193804   40S ribosomal protein S12 
 zma-u.5   103635636   40S ribosomal protein S12-like 
 tae-r.2   123113572   40S ribosomal protein S12 
 tae-r.2   123188497   40S ribosomal protein S12 
 tae-r.2   123044932   40S ribosomal protein S12 
 hvu-r.1   123452565   40S ribosomal protein S12-like 
 hvu-r.1   123426094   40S ribosomal protein S12 
 sbi-r.1   8083795   40S ribosomal protein S12 
 sbi-r.1   8078455   40S ribosomal protein S12 
 sbi-r.1   8077134   40S ribosomal protein S12 
 bdi-r.1   100839439   40S ribosomal protein S12 
 bdi-r.1   100823604   40S ribosomal protein S12 
 cre-r.1   CHLRE_04g214503v5   ribosomal protein S12;uncharacterized protein 

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Top 50 coexpressed genes to 107893657 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107893657 (ghi-r.1 coexpression data)

CoexMap"107893657"


ghiLOC107893657 | Entrez gene ID : 107893657    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 1 3 2 3 3 3 3 3 2 3 3 2 3 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0006412 [list] [network] translation  (1487 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (268 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
Protein XP_016674200.1 [sequence] [blastp]
XP_016674201.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 8,  chlo 1  (predict for XP_016674200.1)
cyto 8,  chlo 1  (predict for XP_016674201.1)
Subcellular
localization
TargetP
other 7  (predict for XP_016674200.1)
other 7  (predict for XP_016674201.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107893657
ghi-r.1
for
107888433
ghi-r.1
for
107893427
ghi-r.1
for
107901582
ath-u.5
for
AT2G32060
ath-u.5
for
AT1G15930
bra-r.6
for
103865180
bra-r.6
for
103867690
bra-r.6
for
103872393
bna-r.1
for
106390173
bna-r.1
for
106399323
bna-r.1
for
106346799
cit-r.1
for
102613535
gma-u.5
for
100499723
gma-u.5
for
100500093
gma-u.5
for
100786733
vvi-u.5
for
100255187
vvi-u.5
for
100265590
ppo-u.5
for
7464817
ppo-u.5
for
7468719
ppo-u.5
for
7493221
mtr-u.5
for
11436487
mtr-u.5
for
11436771
mtr-u.5
for
11433925
sly-u.5
for
101247070
sly-u.5
for
101256955
sly-u.5
for
101257841
sot-r.1
for
102603178
sot-r.1
for
102582055
sot-r.1
for
102598170
nta-r.1
for
107771517
nta-r.1
for
107822385
nta-r.1
for
107807381
osa-u.5
for
4342408
osa-u.5
for
4342771
zma-u.5
for
100282880
zma-u.5
for
100193804
zma-u.5
for
103635636
tae-r.2
for
123113572
tae-r.2
for
123188497
tae-r.2
for
123044932
hvu-r.1
for
123452565
hvu-r.1
for
123426094
sbi-r.1
for
8083795
sbi-r.1
for
8078455
sbi-r.1
for
8077134
bdi-r.1
for
100839439
bdi-r.1
for
100823604
cre-r.1
for
CHLRE_04g214503v5


Ortholog ID: 1533
Species ghi ghi ath ath bra bra bra bna bna bna cit gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi cre
Symbol LOC107888433 LOC121204815 AT2G32060 AT1G15930 LOC103867690 LOC103842873 LOC103857421 LOC106346799 LOC106387977 LOC106454824 LOC102613535 LOC100499723 LOC100786733 LOC100305687 LOC100255187 LOC100265590 LOC7464817 LOC7493221 LOC7487060 LOC11436487 LOC11436771 LOC11433925 LOC101247070 LOC101256955 LOC101257841 LOC102603178 LOC102582055 LOC102598170 LOC107771517 LOC107822385 LOC107774609 LOC4342408 LOC4342771 LOC100282880 LOC100193804 LOC100281932 LOC123188497 LOC123044932 LOC123105304 LOC123452565 LOC123426094 LOC8083795 LOC8078455 LOC8077134 LOC100839439 LOC100823604 CHLRE_04g214503v5
Function* 40S ribosomal protein S12-2 40S ribosomal protein S12 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 40S ribosomal protein S12-1 40S ribosomal protein S12-2 40S ribosomal protein S12-2 40S ribosomal protein S12-1 40S ribosomal protein S12-2 40S ribosomal protein S12-1-like 40S ribosomal protein S12 uncharacterized LOC100499723 40S ribosomal protein S12 uncharacterized LOC100305687 small ribosomal subunit protein eS12 small ribosomal subunit protein eS12 40S ribosomal protein S12 40S ribosomal protein S12 40S ribosomal protein S12 40S ribosomal protein S12-2 40S ribosomal protein S12 40S ribosomal protein S12 small ribosomal subunit protein eS12 small ribosomal subunit protein eS12 small ribosomal subunit protein eS12 40S ribosomal protein S12-like 40S ribosomal protein S12-like 40S ribosomal protein S12-like small ribosomal subunit protein eS12 small ribosomal subunit protein eS12-like small ribosomal subunit protein eS12-like small ribosomal subunit protein eS12 40S ribosomal protein S12 ribosomal proteinS12 (homolog) 40S ribosomal protein S12 40S ribosomal protein S12-like 40S ribosomal protein S12 40S ribosomal protein S12 40S ribosomal protein S12 40S ribosomal protein S12-like 40S ribosomal protein S12 40S ribosomal protein S12 40S ribosomal protein S12 40S ribosomal protein S12 40S ribosomal protein S12 40S ribosomal protein S12 ribosomal protein S12;uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
ppo03015 mRNA surveillance pathway 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 20
mtr04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 20
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 21
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 12
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 13
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 19
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 21
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107888433 121204815 817766 838163 103867690 103842873 103857421 106346799 106387977 106454824 102613535 100499723 100786733 100305687 100255187 100265590 7464817 7493221 7487060 11436487 11436771 11433925 101247070 101256955 101257841 102603178 102582055 102598170 107771517 107822385 107774609 4342408 4342771 100282880 100193804 100281932 123188497 123044932 123105304 123452565 123426094 8083795 8078455 8077134 100839439 100823604 5724234
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