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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107925228   tobamovirus multiplication protein 1 
 ghi-r.1   107935340   tobamovirus multiplication protein 1 
 ath-u.5   TOM1   tobamovirus multiplication 1 
 bra-r.6   103859471   tobamovirus multiplication protein 1 
 bna-r.1   125590056   tobamovirus multiplication protein 1 
 bna-r.1   106421007   tobamovirus multiplication protein 1 
 bna-r.1   106369179   tobamovirus multiplication protein 1 
 cit-r.1   102611625   tobamovirus multiplication protein 1 
 gma-u.5   100814212   uncharacterized LOC100814212 
 gma-u.5   100777331   tobamovirus multiplication protein 1 
 gma-u.5   100802255   tobamovirus multiplication protein 1 
 vvi-u.5   109121382   tobamovirus multiplication protein 1 
 ppo-u.5   18111276   tobamovirus multiplication protein 1 
 ppo-u.5   7479067   tobamovirus multiplication protein 1 
 mtr-u.5   25486132   tobamovirus multiplication protein 1 
 mtr-u.5   11442697   tobamovirus multiplication protein 1 
 sly-u.5   TH2   tobamovirus multiplication 1 homolog 2 
 sly-u.5   TH3   tobamovirus multiplication 1 homolog 3 
 sot-r.1   102591119   tobamovirus multiplication protein 1 
 sot-r.1   102579443   tobamovirus multiplication protein 1-like 
 sot-r.1   102583873   tobamovirus multiplication protein 1-like 
 nta-r.1   107774702   tobamovirus multiplication protein 1 
 nta-r.1   107827226   tobamovirus multiplication protein 1-like 
 nta-r.1   107822195   tobamovirus multiplication protein 1 
 osa-u.5   4342176   tobamovirus multiplication protein 1 
 osa-u.5   9271241   tobamovirus multiplication protein 1 
 zma-u.5   100283022   uncharacterized LOC100283022 
 zma-u.5   100279488   Tobamovirus multiplication protein 1 
 tae-r.2   123188795   tobamovirus multiplication protein 1 
 tae-r.2   123045155   tobamovirus multiplication protein 1 
 tae-r.2   123052984   tobamovirus multiplication protein 1 
 hvu-r.1   123426382   tobamovirus multiplication protein 1 
 sbi-r.1   8065662   tobamovirus multiplication protein 1 
 sbi-r.1   8054494   tobamovirus multiplication protein 1 
 bdi-r.1   100826269   tobamovirus multiplication protein 1 
 cre-r.1   CHLRE_12g487250v5   uncharacterized protein 

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Top 50 coexpressed genes to 107925228 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107925228 (ghi-r.1 coexpression data)

CoexMap"107894623"


ghiLOC107894623 | Entrez gene ID : 107894623    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 3 1 3 1 2 2 2 3 3 2 2 3 1 2 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_016675370.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 3,  chlo_mito 2,  cyto_pero 2,  cyto_E.R. 2  (predict for XP_016675370.2)
Subcellular
localization
TargetP
other 8  (predict for XP_016675370.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107925228
ghi-r.1
for
107935340
ath-u.5
for
TOM1
bra-r.6
for
103859471
bna-r.1
for
125590056
bna-r.1
for
106421007
bna-r.1
for
106369179
cit-r.1
for
102611625
gma-u.5
for
100814212
gma-u.5
for
100777331
gma-u.5
for
100802255
vvi-u.5
for
109121382
ppo-u.5
for
18111276
ppo-u.5
for
7479067
mtr-u.5
for
25486132
mtr-u.5
for
11442697
sly-u.5
for
TH2
sly-u.5
for
TH3
sot-r.1
for
102591119
sot-r.1
for
102579443
sot-r.1
for
102583873
nta-r.1
for
107774702
nta-r.1
for
107827226
nta-r.1
for
107822195
osa-u.5
for
4342176
osa-u.5
for
9271241
zma-u.5
for
100283022
zma-u.5
for
100279488
tae-r.2
for
123188795
tae-r.2
for
123045155
tae-r.2
for
123052984
hvu-r.1
for
123426382
sbi-r.1
for
8065662
sbi-r.1
for
8054494
bdi-r.1
for
100826269
cre-r.1
for
CHLRE_12g487250v5


Ortholog ID: 3484
Species ghi ath bra bna bna bna cit gma gma gma vvi ppo ppo mtr mtr sly sly sot sot sot nta nta nta osa osa zma zma tae tae tae hvu sbi sbi bdi cre
Symbol LOC107935340 TOM1 LOC103859471 LOC125590056 LOC106421007 LOC106347897 LOC102611625 LOC100814212 LOC100777331 LOC100814973 LOC109121382 LOC18111276 LOC7479067 LOC25486132 LOC11442697 TH2 TH3 LOC102591119 LOC102579443 LOC102583873 LOC107827226 LOC107806259 LOC107776768 LOC4342176 LOC9271241 LOC100283022 LOC100279488 LOC123188795 LOC123045155 LOC123052984 LOC123426382 LOC8065662 LOC8054494 LOC100826269 CHLRE_12g487250v5
Function* tobamovirus multiplication protein 1 tobamovirus multiplication 1 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 uncharacterized LOC100814212 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 tobamovirus multiplication 1 homolog 2 tobamovirus multiplication 1 homolog 3 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1-like tobamovirus multiplication protein 1-like tobamovirus multiplication protein 1-like tobamovirus multiplication protein 1-like tobamovirus multiplication protein 1-like tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 uncharacterized LOC100283022 Tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00052 Galactose metabolism 2
ghi00511 Other glycan degradation 2
ghi00600 Sphingolipid metabolism 2
ghi00480 Glutathione metabolism 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 4
ath04145 Phagosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00770 Pantothenate and CoA biosynthesis 2
gma01240 Biosynthesis of cofactors 2
gma00941 Flavonoid biosynthesis 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00061 Fatty acid biosynthesis 4
mtr01212 Fatty acid metabolism 4
mtr01240 Biosynthesis of cofactors 3
mtr03050 Proteasome 3
mtr00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 8
sly03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
sly03013 Nucleocytoplasmic transport 2
sly03083 Polycomb repressive complex 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 4
sot00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 2
sot04016 MAPK signaling pathway - plant 2
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta00061 Fatty acid biosynthesis 2
nta01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
nta04141 Protein processing in endoplasmic reticulum 2
nta00330 Arginine and proline metabolism 2
nta00190 Oxidative phosphorylation 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00052 Galactose metabolism 5
zma00500 Starch and sucrose metabolism 5
zma00520 Amino sugar and nucleotide sugar metabolism 5
zma01250 Biosynthesis of nucleotide sugars 5
zma00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 5
tae04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 3
sbi04142 Lysosome 2
sbi04145 Phagosome 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 3
cre04148 Efferocytosis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107935340 828267 103859471 125590056 106421007 106347897 102611625 100814212 100777331 100814973 109121382 18111276 7479067 25486132 11442697 778314 778361 102591119 102579443 102583873 107827226 107806259 107776768 4342176 9271241 100283022 100279488 123188795 123045155 123052984 123426382 8065662 8054494 100826269 5716641
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