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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107895100   DEAD-box ATP-dependent RNA helicase FANCM 
 ath-u.5   FANCM   DEAD/DEAH box RNA helicase family protein 
 gma-u.5   100820078   DEAD-box ATP-dependent RNA helicase FANCM 
 vvi-u.5   100254868   DEAD-box ATP-dependent RNA helicase FANCM 
 ppo-u.5   7494449   DEAD-box ATP-dependent RNA helicase FANCM 
 mtr-u.5   25485169   DEAD-box ATP-dependent RNA helicase FANCM 
 sly-u.5   101256834   DEAD-box ATP-dependent RNA helicase FANCM 
 osa-u.5   9272231   DEAD-box ATP-dependent RNA helicase FANCM 
 zma-u.5   103654570   DEAD/DEAH box RNA helicase family protein 

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Top 50 coexpressed genes to 107895100 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107895100 (ghi-r.1 coexpression data)

CoexMap"107895100"


ghiLOC107895100 | Entrez gene ID : 107895100    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03460 [list] [network] Fanconi anemia pathway (91 genes)
GO BP
GO:0045003 [list] [network] double-strand break repair via synthesis-dependent strand annealing  (14 genes)  IEA  
GO:0036297 [list] [network] interstrand cross-link repair  (28 genes)  IEA  
GO CC
GO MF
GO:0000400 [list] [network] four-way junction DNA binding  (10 genes)  IEA  
GO:0009378 [list] [network] four-way junction helicase activity  (14 genes)  IEA  
GO:0043138 [list] [network] 3'-5' DNA helicase activity  (28 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5155 genes)  IEA  
GO:0016787 [list] [network] hydrolase activity  (6801 genes)  IEA  
Protein XP_016675816.2 [sequence] [blastp]
XP_016675817.2 [sequence] [blastp]
XP_040942009.1 [sequence] [blastp]
XP_040942010.1 [sequence] [blastp]
XP_040942011.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  chlo 3,  cysk_nucl 2,  plas 1,  vacu 1  (predict for XP_016675816.2)
nucl 4,  cyto 4,  cysk 1  (predict for XP_016675817.2)
nucl 3,  chlo 3,  cysk_nucl 2,  plas 1,  vacu 1  (predict for XP_040942009.1)
nucl 10  (predict for XP_040942010.1)
nucl 6,  chlo 2,  mito 1  (predict for XP_040942011.1)
Subcellular
localization
TargetP
other 7  (predict for XP_016675816.2)
mito 4  (predict for XP_016675817.2)
other 7  (predict for XP_040942009.1)
other 9  (predict for XP_040942010.1)
mito 4,  other 4  (predict for XP_040942011.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107895100
ath-u.5
for
FANCM
gma-u.5
for
100820078
vvi-u.5
for
100254868
ppo-u.5
for
7494449
mtr-u.5
for
25485169
sly-u.5
for
101256834
osa-u.5
for
9272231
zma-u.5
for
103654570


Ortholog ID: 10502
Species ghi ghi ath bra bna bna cit gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC107948805 LOC107895100 FANCM LOC103868821 LOC106451832 LOC106423789 LOC102619291 LOC100820078 LOC100254868 LOC7494449 LOC25485169 LOC101256834 LOC102601608 LOC107824176 LOC107817060 LOC9272231 LOC103654570 LOC123086669 LOC123091290 LOC123447944 LOC8079734 LOC100835661 CHLRE_03g208833v5
Function* DEAD-box ATP-dependent RNA helicase FANCM DEAD-box ATP-dependent RNA helicase FANCM DEAD/DEAH box RNA helicase family protein DEAD-box ATP-dependent RNA helicase FANCM DEAD-box ATP-dependent RNA helicase FANCM DEAD-box ATP-dependent RNA helicase FANCM DEAD-box ATP-dependent RNA helicase FANCM DEAD-box ATP-dependent RNA helicase FANCM DEAD-box ATP-dependent RNA helicase FANCM DEAD-box ATP-dependent RNA helicase FANCM DEAD-box ATP-dependent RNA helicase FANCM DEAD-box ATP-dependent RNA helicase FANCM uncharacterized LOC102601608 DEAD-box ATP-dependent RNA helicase FANCM DEAD-box ATP-dependent RNA helicase FANCM DEAD-box ATP-dependent RNA helicase FANCM DEAD/DEAH box RNA helicase family protein DEAD-box ATP-dependent RNA helicase FANCM DEAD-box ATP-dependent RNA helicase FANCM DEAD-box ATP-dependent RNA helicase FANCM DEAD-box ATP-dependent RNA helicase FANCM DEAD-box ATP-dependent RNA helicase FANCM uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 2
ghi03018 RNA degradation 2
ghi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 2
ghi03018 RNA degradation 2
ghi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 4
ath03460 Fanconi anemia pathway 3
ath03440 Homologous recombination 3
ath03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03460 Fanconi anemia pathway 3
bra03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03460 Fanconi anemia pathway 5
gma03030 DNA replication 4
gma03440 Homologous recombination 3
gma03430 Mismatch repair 3
gma03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03440 Homologous recombination 3
vvi03015 mRNA surveillance pathway 3
vvi03460 Fanconi anemia pathway 2
vvi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 5
sly03460 Fanconi anemia pathway 3
sly03430 Mismatch repair 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03460 Fanconi anemia pathway 2
sot03430 Mismatch repair 2
sot00270 Cysteine and methionine metabolism 2
sot03440 Homologous recombination 2
sot03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04814 Motor proteins 4
osa03460 Fanconi anemia pathway 3
osa03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 3
zma03013 Nucleocytoplasmic transport 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 6
tae03460 Fanconi anemia pathway 6
tae04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03460 Fanconi anemia pathway 5
tae04814 Motor proteins 4
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03460 Fanconi anemia pathway 2
sbi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107948805 107895100 840448 103868821 106451832 106423789 102619291 100820078 100254868 7494449 25485169 101256834 102601608 107824176 107817060 9272231 103654570 123086669 123091290 123447944 8079734 100835661 5725008
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