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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107895466   asparagine--tRNA ligase, chloroplastic/mitochondrial 
 ghi-r.1   107890642   asparagine--tRNA ligase, chloroplastic/mitochondrial 
 ghi-r.1   107901140   asparagine--tRNA ligase, cytoplasmic 1 
 ghi-r.1   107962687   asparagine--tRNA ligase, cytoplasmic 1 
 ath-u.5   NS1   Class II aminoacyl-tRNA and biotin synthetases superfamily protein 
 ath-u.5   SYNC1   Class II aminoacyl-tRNA and biotin synthetases superfamily protein 
 ath-u.5   SYNC3   Class II aminoacyl-tRNA and biotin synthetases superfamily protein 
 bra-r.6   103834005   asparagine--tRNA ligase, chloroplastic/mitochondrial 
 bra-r.6   103845100   asparagine--tRNA ligase, cytoplasmic 1 
 bra-r.6   103856804   asparagine--tRNA ligase, cytoplasmic 1 
 bna-r.1   106360712   asparagine--tRNA ligase, chloroplastic/mitochondrial 
 bna-r.1   106381481   asparagine--tRNA ligase, chloroplastic/mitochondrial 
 bna-r.1   106371467   asparagine--tRNA ligase, cytoplasmic 1 
 cit-r.1   102611476   asparagine--tRNA ligase, cytoplasmic 1 
 cit-r.1   102607244   asparagine--tRNA ligase, chloroplastic/mitochondrial 
 gma-u.5   100790605   asparagine--tRNA ligase, cytoplasmic 1 
 gma-u.5   100796860   asparagine--tRNA ligase, chloroplastic/mitochondrial 
 gma-u.5   100801732   asparagine--tRNA ligase, chloroplastic/mitochondrial 
 vvi-u.5   100249892   asparagine--tRNA ligase, chloroplastic/mitochondrial 
 vvi-u.5   100257593   asparagine--tRNA ligase, cytoplasmic 1 
 ppo-u.5   7469583   asparagine--tRNA ligase, chloroplastic/mitochondrial 
 ppo-u.5   7484683   asparagine--tRNA ligase, cytoplasmic 1 
 ppo-u.5   18106906   asparagine--tRNA ligase, chloroplastic/mitochondrial 
 mtr-u.5   11434753   asparagine--tRNA ligase, cytoplasmic 1 
 mtr-u.5   11412373   asparagine--tRNA ligase, cytoplasmic 1 
 mtr-u.5   11409968   asparagine--tRNA ligase, chloroplastic/mitochondrial 
 sly-u.5   ats1   putative asparaginyl-tRNA synthetase 
 sly-u.5   101254276   asparagine--tRNA ligase, chloroplastic/mitochondrial 
 sot-r.1   102578894   asparagine--tRNA ligase, chloroplastic/mitochondrial 
 sot-r.1   102603407   asparagine--tRNA ligase, cytoplasmic 1-like 
 nta-r.1   107809566   asparagine--tRNA ligase, chloroplastic/mitochondrial 
 nta-r.1   107799901   asparagine--tRNA ligase, cytoplasmic 1 
 nta-r.1   107785502   asparagine--tRNA ligase, cytoplasmic 1 
 osa-u.5   4343250   asparagine--tRNA ligase, chloroplastic/mitochondrial 
 osa-u.5   4325717   asparagine--tRNA ligase, cytoplasmic 3 
 zma-u.5   103633183   asparagine--tRNA ligase, chloroplastic/mitochondrial 
 zma-u.5   100281485   uncharacterized LOC100281485 
 zma-u.5   100217176   uncharacterized LOC100217176 
 tae-r.2   123038636   asparagine--tRNA ligase, cytoplasmic 1 
 tae-r.2   123044818   asparagine--tRNA ligase, chloroplastic/mitochondrial 
 tae-r.2   123052636   asparagine--tRNA ligase, chloroplastic/mitochondrial 
 hvu-r.1   123425107   asparagine--tRNA ligase, cytoplasmic 1-like 
 hvu-r.1   123425975   asparagine--tRNA ligase, chloroplastic/mitochondrial 
 sbi-r.1   8060003   asparagine--tRNA ligase, cytoplasmic 1 
 sbi-r.1   8081503   asparagine--tRNA ligase, cytoplasmic 1 
 sbi-r.1   8080686   asparagine--tRNA ligase, chloroplastic/mitochondrial 
 bdi-r.1   100827886   asparagine--tRNA ligase, cytoplasmic 1 
 bdi-r.1   100830162   asparagine--tRNA ligase, chloroplastic/mitochondrial 
 cre-r.1   CHLRE_03g193800v5   uncharacterized protein 

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Top 50 coexpressed genes to 107895466 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107895466 (ghi-r.1 coexpression data)

CoexMap"107895466"


ghiLOC107895466 | Entrez gene ID : 107895466    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 2 3 2 3 3 2 2 3 2 3 3 2 3 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00970 [list] [network] Aminoacyl-tRNA biosynthesis (172 genes)
GO BP
GO:0006421 [list] [network] asparaginyl-tRNA aminoacylation  (22 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (1525 genes)  IEA  
GO MF
GO:0004816 [list] [network] asparagine-tRNA ligase activity  (22 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5155 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (9083 genes)  IEA  
Protein XP_016676229.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  chlo_mito 4,  cyto_mito 1  (predict for XP_016676229.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_016676229.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107895466
ghi-r.1
for
107890642
ghi-r.1
for
107901140
ghi-r.1
for
107962687
ath-u.5
for
NS1
ath-u.5
for
SYNC1
ath-u.5
for
SYNC3
bra-r.6
for
103834005
bra-r.6
for
103845100
bra-r.6
for
103856804
bna-r.1
for
106360712
bna-r.1
for
106381481
bna-r.1
for
106371467
cit-r.1
for
102611476
cit-r.1
for
102607244
gma-u.5
for
100790605
gma-u.5
for
100796860
gma-u.5
for
100801732
vvi-u.5
for
100249892
vvi-u.5
for
100257593
ppo-u.5
for
7469583
ppo-u.5
for
7484683
ppo-u.5
for
18106906
mtr-u.5
for
11434753
mtr-u.5
for
11412373
mtr-u.5
for
11409968
sly-u.5
for
ats1
sly-u.5
for
101254276
sot-r.1
for
102578894
sot-r.1
for
102603407
nta-r.1
for
107809566
nta-r.1
for
107799901
nta-r.1
for
107785502
osa-u.5
for
4343250
osa-u.5
for
4325717
zma-u.5
for
103633183
zma-u.5
for
100281485
zma-u.5
for
100217176
tae-r.2
for
123038636
tae-r.2
for
123044818
tae-r.2
for
123052636
hvu-r.1
for
123425107
hvu-r.1
for
123425975
sbi-r.1
for
8060003
sbi-r.1
for
8081503
sbi-r.1
for
8080686
bdi-r.1
for
100827886
bdi-r.1
for
100830162
cre-r.1
for
CHLRE_03g193800v5


Ortholog ID: 2286
Species ghi ghi ghi ath ath ath bra bra bra bna bna bna cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi cre
Symbol LOC107895466 LOC107890642 LOC107962687 NS1 SYNC1 SYNC3 LOC103834005 LOC103856804 LOC103868237 LOC106425466 LOC106432830 LOC106436903 LOC102611476 LOC102607244 LOC100790605 LOC100796860 LOC100801732 LOC100249892 LOC100257593 LOC7469583 LOC7484683 LOC18107659 LOC11434753 LOC11412373 LOC11409968 ats1 LOC101254276 LOC102578894 LOC102603407 LOC107809566 LOC107785502 LOC107776004 LOC4343250 LOC4325717 LOC103633183 LOC100281485 LOC100217176 LOC123038636 LOC123052636 LOC123188520 LOC123425107 LOC123425975 LOC8060003 LOC8081503 LOC8080686 LOC100827886 LOC100830162 CHLRE_03g193800v5
Function* asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, cytoplasmic 1 Class II aminoacyl-tRNA and biotin synthetases superfamily protein Class II aminoacyl-tRNA and biotin synthetases superfamily protein Class II aminoacyl-tRNA and biotin synthetases superfamily protein asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, cytoplasmic 1 asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, cytoplasmic 1 asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, cytoplasmic 1 asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, cytoplasmic 1 asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, cytoplasmic 1 asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, cytoplasmic 1 asparagine--tRNA ligase, cytoplasmic 1 asparagine--tRNA ligase, cytoplasmic 1 asparagine--tRNA ligase, cytoplasmic 1 asparagine--tRNA ligase, chloroplastic/mitochondrial putative asparaginyl-tRNA synthetase asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, cytoplasmic 1-like asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, cytoplasmic 1 asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, cytoplasmic 3 asparagine--tRNA ligase, chloroplastic/mitochondrial uncharacterized LOC100281485 uncharacterized LOC100217176 asparagine--tRNA ligase, cytoplasmic 1 asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, cytoplasmic 1-like asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, cytoplasmic 1 asparagine--tRNA ligase, cytoplasmic 1 asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, cytoplasmic 1 asparagine--tRNA ligase, chloroplastic/mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi00480 Glutathione metabolism 2
ghi00196 Photosynthesis - antenna proteins 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi03018 RNA degradation 2
ghi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 9
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi00860 Porphyrin metabolism 3
ghi01240 Biosynthesis of cofactors 3
ghi00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03083 Polycomb repressive complex 2
ath03040 Spliceosome 2
ath04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 3
bra00860 Porphyrin metabolism 3
bra01240 Biosynthesis of cofactors 3
bra03010 Ribosome 3
bra03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
bna00561 Glycerolipid metabolism 2
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
bna00561 Glycerolipid metabolism 2
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 4
cit04141 Protein processing in endoplasmic reticulum 2
cit03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 2
gma00970 Aminoacyl-tRNA biosynthesis 2
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 3
vvi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
vvi00970 Aminoacyl-tRNA biosynthesis 4
vvi04141 Protein processing in endoplasmic reticulum 3
vvi03015 mRNA surveillance pathway 2
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 3
mtr03040 Spliceosome 3
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 3
mtr03018 RNA degradation 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 4
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 6
sly00860 Porphyrin metabolism 5
sly00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 8
sot00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta03010 Ribosome 4
nta00750 Vitamin B6 metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta03013 Nucleocytoplasmic transport 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
nta00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 7
nta03010 Ribosome 4
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 8
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 2
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 7
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
zma00970 Aminoacyl-tRNA biosynthesis 2
zma00561 Glycerolipid metabolism 2
zma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 10
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 7
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03010 Ribosome 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 4
sbi03010 Ribosome 3
sbi00300 Lysine biosynthesis 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 3
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 6
bdi03013 Nucleocytoplasmic transport 3
bdi03010 Ribosome 3
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 9
cre01230 Biosynthesis of amino acids 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107895466 107890642 107962687 827443 835769 843436 103834005 103856804 103868237 106425466 106432830 106436903 102611476 102607244 100790605 100796860 100801732 100249892 100257593 7469583 7484683 18107659 11434753 11412373 11409968 543755 101254276 102578894 102603407 107809566 107785502 107776004 4343250 4325717 103633183 100281485 100217176 123038636 123052636 123188520 123425107 123425975 8060003 8081503 8080686 100827886 100830162 5718708
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