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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107896550   pentatricopeptide repeat-containing protein At1g79490, mitochondrial 
 ghi-r.1   107916290   pentatricopeptide repeat-containing protein At1g79490, mitochondrial 
 ath-u.5   EMB2217   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103830482   pentatricopeptide repeat-containing protein At1g79490, mitochondrial 
 bna-r.1   106353405   pentatricopeptide repeat-containing protein At1g79490, mitochondrial 
 bna-r.1   106406741   pentatricopeptide repeat-containing protein At1g79490, mitochondrial 
 cit-r.1   102608109   pentatricopeptide repeat-containing protein At1g79490, mitochondrial 
 gma-u.5   100818399   pentatricopeptide repeat-containing protein At1g79490, mitochondrial 
 vvi-u.5   100259080   pentatricopeptide repeat-containing protein At1g79490, mitochondrial 
 ppo-u.5   7464556   pentatricopeptide repeat-containing protein At1g79490, mitochondrial 
 mtr-u.5   25495129   pentatricopeptide repeat-containing protein At1g79490, mitochondrial-like 
 mtr-u.5   112421307   pentatricopeptide repeat-containing protein At1g79490, mitochondrial 
 sly-u.5   101268599   pentatricopeptide repeat-containing protein At1g79490, mitochondrial 
 sot-r.1   102598668   pentatricopeptide repeat-containing protein At1g79490, mitochondrial 
 nta-r.1   107815375   pentatricopeptide repeat-containing protein At1g79490, mitochondrial-like 
 nta-r.1   107822029   pentatricopeptide repeat-containing protein At1g79490, mitochondrial 
 osa-u.5   4336969   pentatricopeptide repeat-containing protein At1g79490, mitochondrial 
 zma-u.5   103645953   pentatricopeptide repeat-containing protein At1g79490, mitochondrial 
 tae-r.2   123190197   pentatricopeptide repeat-containing protein At1g79490, mitochondrial-like 
 tae-r.2   123054311   pentatricopeptide repeat-containing protein At1g79490, mitochondrial 
 tae-r.2   123046462   pentatricopeptide repeat-containing protein At1g79490, mitochondrial 
 hvu-r.1   123427627   pentatricopeptide repeat-containing protein At1g79490, mitochondrial 
 sbi-r.1   8063958   pentatricopeptide repeat-containing protein At1g79490, mitochondrial 
 bdi-r.1   100836216   pentatricopeptide repeat-containing protein At1g79490, mitochondrial 

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Top 50 coexpressed genes to 107896550 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107896550 (ghi-r.1 coexpression data)

CoexMap"107896550"


ghiLOC107896550 | Entrez gene ID : 107896550    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 1 1 1 2 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016677234.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  chlo_mito 5,  mito 2  (predict for XP_016677234.1)
Subcellular
localization
TargetP
chlo 6,  mito 4  (predict for XP_016677234.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107896550
ghi-r.1
for
107916290
ath-u.5
for
EMB2217
bra-r.6
for
103830482
bna-r.1
for
106353405
bna-r.1
for
106406741
cit-r.1
for
102608109
gma-u.5
for
100818399
vvi-u.5
for
100259080
ppo-u.5
for
7464556
mtr-u.5
for
25495129
mtr-u.5
for
112421307
sly-u.5
for
101268599
sot-r.1
for
102598668
nta-r.1
for
107815375
nta-r.1
for
107822029
osa-u.5
for
4336969
zma-u.5
for
103645953
tae-r.2
for
123190197
tae-r.2
for
123054311
tae-r.2
for
123046462
hvu-r.1
for
123427627
sbi-r.1
for
8063958
bdi-r.1
for
100836216


Ortholog ID: 11142
Species ghi ghi ath bra bna bna cit gma vvi ppo mtr mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC107896550 LOC107916290 EMB2217 LOC103830482 LOC106353405 LOC106406741 LOC102608109 LOC100818399 LOC100259080 LOC7464556 LOC25495129 LOC112421307 LOC101268599 LOC102598668 LOC107815375 LOC107822029 LOC4336969 LOC103645953 LOC123190197 LOC123054311 LOC123046462 LOC123427627 LOC8063958 LOC100836216
Function* pentatricopeptide repeat-containing protein At1g79490, mitochondrial pentatricopeptide repeat-containing protein At1g79490, mitochondrial Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g79490, mitochondrial pentatricopeptide repeat-containing protein At1g79490, mitochondrial pentatricopeptide repeat-containing protein At1g79490, mitochondrial pentatricopeptide repeat-containing protein At1g79490, mitochondrial pentatricopeptide repeat-containing protein At1g79490, mitochondrial pentatricopeptide repeat-containing protein At1g79490, mitochondrial pentatricopeptide repeat-containing protein At1g79490, mitochondrial pentatricopeptide repeat-containing protein At1g79490, mitochondrial-like pentatricopeptide repeat-containing protein At1g79490, mitochondrial pentatricopeptide repeat-containing protein At1g79490, mitochondrial pentatricopeptide repeat-containing protein At1g79490, mitochondrial pentatricopeptide repeat-containing protein At1g79490, mitochondrial-like pentatricopeptide repeat-containing protein At1g79490, mitochondrial pentatricopeptide repeat-containing protein At1g79490, mitochondrial pentatricopeptide repeat-containing protein At1g79490, mitochondrial pentatricopeptide repeat-containing protein At1g79490, mitochondrial-like pentatricopeptide repeat-containing protein At1g79490, mitochondrial pentatricopeptide repeat-containing protein At1g79490, mitochondrial pentatricopeptide repeat-containing protein At1g79490, mitochondrial pentatricopeptide repeat-containing protein At1g79490, mitochondrial pentatricopeptide repeat-containing protein At1g79490, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 6
nta03430 Mismatch repair 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta00220 Arginine biosynthesis 3
nta00240 Pyrimidine metabolism 3
nta00250 Alanine, aspartate and glutamate metabolism 3
nta01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa03010 Ribosome 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00220 Arginine biosynthesis 2
zma00240 Pyrimidine metabolism 2
zma00250 Alanine, aspartate and glutamate metabolism 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
sbi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107896550 107916290 844287 103830482 106353405 106406741 102608109 100818399 100259080 7464556 25495129 112421307 101268599 102598668 107815375 107822029 4336969 103645953 123190197 123054311 123046462 123427627 8063958 100836216
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