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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107896915   flowering time control protein FPA 
 ghi-r.1   107915397   flowering time control protein FPA 
 ghi-r.1   107938713   flowering time control protein FPA 
 ghi-r.1   107927465   flowering time control protein FPA 
 ath-u.5   FPA   RNA binding protein 
 bra-r.6   103866714   flowering time control protein FPA 
 bra-r.6   103841798   flowering time control protein FPA 
 bna-r.1   106368328   flowering time control protein FPA 
 bna-r.1   106421165   flowering time control protein FPA 
 bna-r.1   106396161   flowering time control protein FPA 
 cit-r.1   102630663   flowering time control protein FPA 
 gma-u.5   100810601   flowering time control protein FPA 
 gma-u.5   100806555   flowering time control protein FPA 
 gma-u.5   100795342   flowering time control protein FPA 
 vvi-u.5   100250802   flowering time control protein FPA 
 ppo-u.5   7491740   flowering time control protein FPA 
 ppo-u.5   18108704   flowering time control protein FPA 
 mtr-u.5   11412967   flowering time control protein FPA 
 sly-u.5   101267242   flowering time control protein FPA 
 sot-r.1   102604195   flowering time control protein FPA 
 nta-r.1   107763232   flowering time control protein FPA-like 
 nta-r.1   107788536   flowering time control protein FPA 
 osa-u.5   4347579   flowering time control protein FPA 
 zma-u.5   103633041   flowering time control protein FPA 
 tae-r.2   123122192   flowering time control protein FPA 
 tae-r.2   123112714   flowering time control protein FPA 
 tae-r.2   123104394   flowering time control protein FPA 
 hvu-r.1   123399925   flowering time control protein FPA 
 sbi-r.1   8063888   flowering time control protein FPA 
 bdi-r.1   100825444   flowering time control protein FPA 

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Top 50 coexpressed genes to 107896915 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107896915 (ghi-r.1 coexpression data)

CoexMap"107896915"


ghiLOC107896915 | Entrez gene ID : 107896915    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 2 3 1 3 1 2 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
Protein XP_016677709.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1  (predict for XP_016677709.2)
Subcellular
localization
TargetP
other 8  (predict for XP_016677709.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107896915
ghi-r.1
for
107915397
ghi-r.1
for
107938713
ghi-r.1
for
107927465
ath-u.5
for
FPA
bra-r.6
for
103866714
bra-r.6
for
103841798
bna-r.1
for
106368328
bna-r.1
for
106421165
bna-r.1
for
106396161
cit-r.1
for
102630663
gma-u.5
for
100810601
gma-u.5
for
100806555
gma-u.5
for
100795342
vvi-u.5
for
100250802
ppo-u.5
for
7491740
ppo-u.5
for
18108704
mtr-u.5
for
11412967
sly-u.5
for
101267242
sot-r.1
for
102604195
nta-r.1
for
107763232
nta-r.1
for
107788536
osa-u.5
for
4347579
zma-u.5
for
103633041
tae-r.2
for
123122192
tae-r.2
for
123112714
tae-r.2
for
123104394
hvu-r.1
for
123399925
sbi-r.1
for
8063888
bdi-r.1
for
100825444


Ortholog ID: 6848
Species ghi ghi ghi ath bra bra bna bna bna cit gma gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC107896915 LOC107915397 LOC107938713 FPA LOC103866714 LOC103841798 LOC106368328 LOC106421165 LOC106396161 LOC102630663 LOC100810601 LOC100806555 LOC100777570 LOC100250802 LOC7491740 LOC18108704 LOC11412967 LOC101267242 LOC102604195 LOC107763232 LOC107788536 LOC4347579 LOC103633041 LOC123122192 LOC123112714 LOC123104394 LOC123399925 LOC8063888 LOC100825444
Function* flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA RNA binding protein flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA-like flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA flowering time control protein FPA
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
bra04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 3
bna03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 3
bna03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107896915 107915397 107938713 818942 103866714 103841798 106368328 106421165 106396161 102630663 100810601 100806555 100777570 100250802 7491740 18108704 11412967 101267242 102604195 107763232 107788536 4347579 103633041 123122192 123112714 123104394 123399925 8063888 100825444
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