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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107896921   60S ribosomal protein L38 
 ghi-r.1   107942364   60S ribosomal protein L38 
 ghi-r.1   107923339   60S ribosomal protein L38 
 ghi-r.1   107927485   60S ribosomal protein L38 
 ath-u.5   AT2G43460   Ribosomal L38e protein family 
 ath-u.5   AT3G59540   Ribosomal L38e protein family 
 bra-r.6   103830220   60S ribosomal protein L38 
 bra-r.6   103841797   60S ribosomal protein L38 
 bra-r.6   103866072   60S ribosomal protein L38 
 bna-r.1   125608372   60S ribosomal protein L38-like 
 bna-r.1   106365037   60S ribosomal protein L38 
 bna-r.1   106368453   60S ribosomal protein L38 
 cit-r.1   102619410   60S ribosomal protein L38 
 cit-r.1   102610590   60S ribosomal protein L38 
 gma-u.5   100305707   60S ribosomal protein L38 
 gma-u.5   100806030   60S ribosomal protein L38 
 gma-u.5   100805669   60S ribosomal protein L38 
 vvi-u.5   100268138   60S ribosomal protein L38 
 vvi-u.5   100854038   large ribosomal subunit protein eL38z/eL38y 
 ppo-u.5   18106877   60S ribosomal protein L38 
 ppo-u.5   7474400   60S ribosomal protein L38 
 ppo-u.5   7491734   60S ribosomal protein L38 
 mtr-u.5   120577197   60S ribosomal protein L38 
 mtr-u.5   25501689   60S ribosomal protein L38 
 mtr-u.5   11427662   60S ribosomal protein L38 
 sly-u.5   rpl38   ribosomal protein L38 
 sly-u.5   101247384   large ribosomal subunit protein eL38 
 sot-r.1   102598365   60S ribosomal protein L38 
 sot-r.1   102598237   60S ribosomal protein L38-like 
 nta-r.1   107767504   large ribosomal subunit protein eL38 
 osa-u.5   4350406   large ribosomal subunit protein eL38z/eL38y 
 osa-u.5   4343529   large ribosomal subunit protein eL38z/eL38y 
 zma-u.5   110485089   rpL38 
 zma-u.5   100280770   60S ribosomal protein L38-like 
 zma-u.5   103643066   60S ribosomal protein L38-like 
 tae-r.2   123080887   60S ribosomal protein L38 
 tae-r.2   123072702   60S ribosomal protein L38 
 tae-r.2   123066160   60S ribosomal protein L38 
 hvu-r.1   123445617   60S ribosomal protein L38-like 
 hvu-r.1   123425778   60S ribosomal protein L38 
 sbi-r.1   8084094   60S ribosomal protein L38 
 sbi-r.1   8060905   60S ribosomal protein L38 
 bdi-r.1   100830442   60S ribosomal protein L38 
 bdi-r.1   100827860   60S ribosomal protein L38 
 cre-r.1   CHLRE_07g325746v5   ribosomal protein L38 

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Top 50 coexpressed genes to 107896921 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107896921 (ghi-r.1 coexpression data)

CoexMap"107896921"


ghiLOC107896921 | Entrez gene ID : 107896921    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 2 3 2 3 3 2 2 1 2 3 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0022618 [list] [network] protein-RNA complex assembly  (345 genes)  IEA  
GO:0006412 [list] [network] translation  (1487 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (467 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
Protein XP_016677721.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 3,  cyto_nucl 3  (predict for XP_016677721.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016677721.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107896921
ghi-r.1
for
107942364
ghi-r.1
for
107923339
ghi-r.1
for
107927485
ath-u.5
for
AT2G43460
ath-u.5
for
AT3G59540
bra-r.6
for
103830220
bra-r.6
for
103841797
bra-r.6
for
103866072
bna-r.1
for
125608372
bna-r.1
for
106365037
bna-r.1
for
106368453
cit-r.1
for
102619410
cit-r.1
for
102610590
gma-u.5
for
100305707
gma-u.5
for
100806030
gma-u.5
for
100805669
vvi-u.5
for
100268138
vvi-u.5
for
100854038
ppo-u.5
for
18106877
ppo-u.5
for
7474400
ppo-u.5
for
7491734
mtr-u.5
for
120577197
mtr-u.5
for
25501689
mtr-u.5
for
11427662
sly-u.5
for
rpl38
sly-u.5
for
101247384
sot-r.1
for
102598365
sot-r.1
for
102598237
nta-r.1
for
107767504
osa-u.5
for
4350406
osa-u.5
for
4343529
zma-u.5
for
110485089
zma-u.5
for
100280770
zma-u.5
for
103643066
tae-r.2
for
123080887
tae-r.2
for
123072702
tae-r.2
for
123066160
hvu-r.1
for
123445617
hvu-r.1
for
123425778
sbi-r.1
for
8084094
sbi-r.1
for
8060905
bdi-r.1
for
100830442
bdi-r.1
for
100827860
cre-r.1
for
CHLRE_07g325746v5


Ortholog ID: 1615
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sot sot nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC107896921 LOC107939716 LOC107890551 AT2G43460 AT3G59540 LOC103841797 LOC103858070 LOC103866717 LOC111213354 LOC106356809 LOC106450718 LOC102619410 LOC102610590 LOC100305707 LOC100805669 LOC100795924 LOC100268138 LOC100854038 LOC7474400 LOC7491734 LOC7462113 LOC120577197 LOC11427662 LOC11442924 rpl38 LOC101247384 LOC102598365 LOC102598237 LOC107767504 LOC4350406 LOC4343529 LOC110485089 LOC100280770 LOC103643066 LOC123066160 LOC123063571 LOC123188360 LOC123445617 LOC123425778 LOC8084094 LOC8060905 LOC100830442 LOC100827860 CHLRE_07g325746v5
Function* 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 Ribosomal L38e protein family Ribosomal L38e protein family 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38-like 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 large ribosomal subunit protein eL38z/eL38y 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 ribosomal protein L38 large ribosomal subunit protein eL38 60S ribosomal protein L38 60S ribosomal protein L38-like large ribosomal subunit protein eL38 large ribosomal subunit protein eL38z/eL38y large ribosomal subunit protein eL38z/eL38y rpL38 60S ribosomal protein L38-like 60S ribosomal protein L38-like 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38-like 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 60S ribosomal protein L38 ribosomal protein L38
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
ghi03040 Spliceosome 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 15
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 14
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 17
cit00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
mtr03020 RNA polymerase 4
mtr03018 RNA degradation 2
mtr03040 Spliceosome 2
mtr03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 19
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 17
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107896921 107939716 107890551 818947 825123 103841797 103858070 103866717 111213354 106356809 106450718 102619410 102610590 100305707 100805669 100795924 100268138 100854038 7474400 7491734 7462113 120577197 11427662 11442924 544287 101247384 102598365 102598237 107767504 4350406 4343529 110485089 100280770 103643066 123066160 123063571 123188360 123445617 123425778 8084094 8060905 100830442 100827860 5728418
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