Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107897319   RING finger protein 10 
 ghi-r.1   107914178   RING finger protein 10 
 ath-u.5   AT3G26730   RING/U-box superfamily protein 
 bra-r.6   103854301   RING finger protein 10 
 bna-r.1   106367137   RING finger protein 10-like 
 bna-r.1   106402282   RING finger protein 10 
 bna-r.1   125580282   RING finger protein 10-like 
 cit-r.1   102622503   uncharacterized LOC102622503 
 gma-u.5   100818033   RING finger protein 10 
 gma-u.5   100798764   RING finger protein 10 
 vvi-u.5   100248015   uncharacterized LOC100248015 
 ppo-u.5   7462008   uncharacterized LOC7462008 
 mtr-u.5   11436794   RING finger protein 10 
 sly-u.5   101258114   uncharacterized LOC101258114 
 sot-r.1   102589589   RING finger protein 10 
 nta-r.1   107779605   uncharacterized LOC107779605 
 nta-r.1   107776832   uncharacterized LOC107776832 
 osa-u.5   4329478   uncharacterized LOC4329478 
 zma-u.5   100286129   uncharacterized LOC100286129 
 tae-r.2   123103058   RING finger protein 10 
 tae-r.2   123111233   RING finger protein 10 
 tae-r.2   123120296   RING finger protein 10 
 hvu-r.1   123400122   RING finger protein 10 
 sbi-r.1   8059596   RING finger protein 10 
 bdi-r.1   100834224   RING finger protein 10 
 cre-r.1   CHLRE_16g681251v5   uncharacterized protein 
 cre-r.1   CHLRE_16g681250v5   uncharacterized protein 
 cre-r.1   CHLRE_03g144687v5   uncharacterized protein 

close


Top 50 coexpressed genes to 107897319 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 107897319 (ghi-r.1 coexpression data)

CoexMap"107897319"


ghiLOC107897319 | Entrez gene ID : 107897319    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 3 1 2 1 1 1 1 1 2 1 1 3 1 1 1 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (349 genes)  IEA  
GO CC
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (1027 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (4664 genes)  IEA  
Protein XP_016678235.1 [sequence] [blastp]
XP_016678236.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto_nucl 5  (predict for XP_016678235.1)
nucl 9,  cyto_nucl 5  (predict for XP_016678236.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_016678235.1)
chlo 8  (predict for XP_016678236.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107897319
ghi-r.1
for
107914178
ath-u.5
for
AT3G26730
bra-r.6
for
103854301
bna-r.1
for
106367137
bna-r.1
for
106402282
bna-r.1
for
125580282
cit-r.1
for
102622503
gma-u.5
for
100818033
gma-u.5
for
100798764
vvi-u.5
for
100248015
ppo-u.5
for
7462008
mtr-u.5
for
11436794
sly-u.5
for
101258114
sot-r.1
for
102589589
nta-r.1
for
107779605
nta-r.1
for
107776832
osa-u.5
for
4329478
zma-u.5
for
100286129
tae-r.2
for
123103058
tae-r.2
for
123111233
tae-r.2
for
123120296
hvu-r.1
for
123400122
sbi-r.1
for
8059596
bdi-r.1
for
100834224
cre-r.1
for
CHLRE_16g681251v5
cre-r.1
for
CHLRE_16g681250v5
cre-r.1
for
CHLRE_03g144687v5


Ortholog ID: 8486
Species ghi ghi ath bra bna bna bna cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre cre cre
Symbol LOC107897319 LOC107914178 AT3G26730 LOC103854301 LOC106367137 LOC106402282 LOC125580282 LOC102622503 LOC100818033 LOC100798764 LOC100248015 LOC7462008 LOC11436794 LOC101258114 LOC102589589 LOC107779605 LOC107776832 LOC4329478 LOC100286129 LOC123103058 LOC123111233 LOC123120296 LOC123400122 LOC8059596 LOC100834224 CHLRE_16g681251v5 CHLRE_16g681250v5 CHLRE_03g144687v5
Function* RING finger protein 10 RING finger protein 10 RING/U-box superfamily protein RING finger protein 10 RING finger protein 10-like RING finger protein 10 RING finger protein 10-like uncharacterized LOC102622503 RING finger protein 10 RING finger protein 10 uncharacterized LOC100248015 uncharacterized LOC7462008 RING finger protein 10 uncharacterized LOC101258114 RING finger protein 10 uncharacterized LOC107779605 uncharacterized LOC107776832 uncharacterized LOC4329478 uncharacterized LOC100286129 RING finger protein 10 RING finger protein 10 RING finger protein 10 RING finger protein 10 RING finger protein 10 RING finger protein 10 uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 4
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 4
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00270 Cysteine and methionine metabolism 2
cit00330 Arginine and proline metabolism 2
cit03082 ATP-dependent chromatin remodeling 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00541 Biosynthesis of various nucleotide sugars 2
gma00561 Glycerolipid metabolism 2
gma00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 4
nta02010 ABC transporters 2
nta04146 Peroxisome 2
nta03008 Ribosome biogenesis in eukaryotes 2
nta04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 4
nta03083 Polycomb repressive complex 2
nta03250 Viral life cycle - HIV-1 2
nta02010 ABC transporters 2
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00562 Inositol phosphate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00562 Inositol phosphate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00562 Inositol phosphate metabolism 3
tae03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107897319 107914178 822285 103854301 106367137 106402282 125580282 102622503 100818033 100798764 100248015 7462008 11436794 101258114 102589589 107779605 107776832 4329478 100286129 123103058 123111233 123120296 123400122 8059596 100834224 5717552 66056712 66052671
The preparation time of this page was 0.3 [sec].