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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107897433   E3 ubiquitin-protein ligase SPL2 
 ghi-r.1   107913864   E3 ubiquitin-protein ligase SPL2 
 ath-u.5   SPL2   E3 Ubiquitin ligase family protein 
 bra-r.6   103871070   E3 ubiquitin-protein ligase SPL2 
 bra-r.6   103832629   E3 ubiquitin-protein ligase SPL2 
 bna-r.1   106345830   E3 ubiquitin-protein ligase SPL2 
 bna-r.1   106348455   E3 ubiquitin-protein ligase SPL2 
 bna-r.1   106377332   E3 ubiquitin-protein ligase SPL2 
 cit-r.1   102626340   E3 ubiquitin-protein ligase SPL2 
 gma-u.5   100811939   E3 ubiquitin-protein ligase SPL2 
 gma-u.5   100800058   E3 ubiquitin-protein ligase SPL2 
 gma-u.5   100785166   E3 ubiquitin-protein ligase SPL2 
 vvi-u.5   100242895   E3 ubiquitin-protein ligase SPL2 
 ppo-u.5   7475693   E3 ubiquitin-protein ligase SPL2 
 ppo-u.5   7478101   E3 ubiquitin-protein ligase SPL2 
 mtr-u.5   11435018   E3 ubiquitin-protein ligase SPL2 
 sly-u.5   101259919   E3 ubiquitin-protein ligase SPL2 
 sot-r.1   107063398   uncharacterized LOC107063398 
 sot-r.1   102586439   mitochondrial ubiquitin ligase activator of nfkb 1-like 
 nta-r.1   107781398   E3 ubiquitin-protein ligase SPL2 
 nta-r.1   107779675   E3 ubiquitin-protein ligase SPL2-like 
 osa-u.5   4331809   E3 ubiquitin-protein ligase SPL2 
 zma-u.5   100193216   E3 ubiquitin-protein ligase SPL2 
 tae-r.2   123093365   E3 ubiquitin-protein ligase SPL2 
 tae-r.2   123084729   E3 ubiquitin-protein ligase SPL2 
 tae-r.2   123098638   E3 ubiquitin-protein ligase SPL2 
 hvu-r.1   123449598   E3 ubiquitin-protein ligase SPL2 
 sbi-r.1   8082022   E3 ubiquitin-protein ligase SPL2 
 bdi-r.1   100838731   E3 ubiquitin-protein ligase SPL2 

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Top 50 coexpressed genes to 107897433 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107897433 (ghi-r.1 coexpression data)

CoexMap"107897433"


ghiLOC107897433 | Entrez gene ID : 107897433    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 2 3 1 3 1 2 1 1 2 2 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (962 genes)  IEA  
GO:0006996 [list] [network] organelle organization  (2285 genes)  IEA  
GO CC
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (871 genes)  IEA  
Protein XP_016678373.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1  (predict for XP_016678373.1)
Subcellular
localization
TargetP
scret 7  (predict for XP_016678373.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107897433
ghi-r.1
for
107913864
ath-u.5
for
SPL2
bra-r.6
for
103871070
bra-r.6
for
103832629
bna-r.1
for
106345830
bna-r.1
for
106348455
bna-r.1
for
106377332
cit-r.1
for
102626340
gma-u.5
for
100811939
gma-u.5
for
100800058
gma-u.5
for
100785166
vvi-u.5
for
100242895
ppo-u.5
for
7475693
ppo-u.5
for
7478101
mtr-u.5
for
11435018
sly-u.5
for
101259919
sot-r.1
for
107063398
sot-r.1
for
102586439
nta-r.1
for
107781398
nta-r.1
for
107779675
osa-u.5
for
4331809
zma-u.5
for
100193216
tae-r.2
for
123093365
tae-r.2
for
123084729
tae-r.2
for
123098638
hvu-r.1
for
123449598
sbi-r.1
for
8082022
bdi-r.1
for
100838731


Ortholog ID: 7842
Species ghi ghi ath bra bra bna bna bna cit gma gma gma vvi ppo ppo mtr sly sot sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC107897433 LOC107913864 SPL2 LOC103871070 LOC103832629 LOC106345830 LOC106377332 LOC106434648 LOC102626340 LOC100811939 LOC100800058 LOC100785166 LOC100242895 LOC7475693 LOC7478101 LOC11435018 LOC101259919 LOC107063398 LOC102586439 LOC107781398 LOC107779675 LOC4331809 LOC100193216 LOC123093365 LOC123084729 LOC123098638 LOC123449598 LOC8082022 LOC100838731
Function* E3 ubiquitin-protein ligase SPL2 E3 ubiquitin-protein ligase SPL2 E3 Ubiquitin ligase family protein E3 ubiquitin-protein ligase SPL2 E3 ubiquitin-protein ligase SPL2 E3 ubiquitin-protein ligase SPL2 E3 ubiquitin-protein ligase SPL2 E3 ubiquitin-protein ligase SPL2-like E3 ubiquitin-protein ligase SPL2 E3 ubiquitin-protein ligase SPL2 E3 ubiquitin-protein ligase SPL2 E3 ubiquitin-protein ligase SPL2 E3 ubiquitin-protein ligase SPL2 E3 ubiquitin-protein ligase SPL2 E3 ubiquitin-protein ligase SPL2 E3 ubiquitin-protein ligase SPL2 E3 ubiquitin-protein ligase SPL2 uncharacterized LOC107063398 mitochondrial ubiquitin ligase activator of nfkb 1-like E3 ubiquitin-protein ligase SPL2 E3 ubiquitin-protein ligase SPL2-like E3 ubiquitin-protein ligase SPL2 E3 ubiquitin-protein ligase SPL2 E3 ubiquitin-protein ligase SPL2 E3 ubiquitin-protein ligase SPL2 E3 ubiquitin-protein ligase SPL2 E3 ubiquitin-protein ligase SPL2 E3 ubiquitin-protein ligase SPL2 E3 ubiquitin-protein ligase SPL2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 3
ath03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00564 Glycerophospholipid metabolism 2
bra00592 alpha-Linolenic acid metabolism 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04136 Autophagy - other 2
cit04144 Endocytosis 2
cit00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 5
ppo03083 Polycomb repressive complex 3
ppo04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 3
sly03250 Viral life cycle - HIV-1 2
sly03272 Virion - Hepatitis viruses 2
sly04144 Endocytosis 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 3
nta00630 Glyoxylate and dicarboxylate metabolism 3
nta01200 Carbon metabolism 3
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 3
nta00630 Glyoxylate and dicarboxylate metabolism 3
nta01200 Carbon metabolism 3
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 2
tae00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi04146 Peroxisome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107897433 107913864 841855 103871070 103832629 106345830 106377332 106434648 102626340 100811939 100800058 100785166 100242895 7475693 7478101 11435018 101259919 107063398 102586439 107781398 107779675 4331809 100193216 123093365 123084729 123098638 123449598 8082022 100838731
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