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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1  107897743  transcription elongation factor SPT6 homolog 
 ghi-r.1  107924491  transcription elongation factor SPT6-like 
 ghi-r.1  107933943  transcription elongation factor SPT6 homolog 
 ghi-r.1  107951657  transcription elongation factor SPT6 homolog 
 gma-u.5  100796035  transcription elongation factor SPT6 homolog 

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Top 50 coexpressed genes to 107897743 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107897743 (ghi-r.1 coexpression data)

CoexMap"107897743"


ghiLOC107897743 | Entrez gene ID : 107897743
Species ghi gma vvi bdi bna ppo sbi cit hvu sot sly nta osa tae zma cre mtr ath bra
Paralog 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0140673 [list] [network] transcription elongation-coupled chromatin remodeling  (22 genes)  IEA  
GO:0006368 [list] [network] transcription elongation by RNA polymerase II  (65 genes)  IEA  
GO:0034728 [list] [network] nucleosome organization  (113 genes)  IEA  
GO CC
GO:0008023 [list] [network] transcription elongation factor complex  (80 genes)  IEA  
GO MF
GO:0031491 [list] [network] nucleosome binding  (81 genes)  IEA  
GO:0042393 [list] [network] histone binding  (158 genes)  IEA  
Protein XP_016678801.1 [sequence] [blastp]
XP_040935211.1 [sequence] [blastp]
XP_040935212.1 [sequence] [blastp]
XP_040935213.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 2,  plas 1,  golg_plas 1  (predict for XP_016678801.1)
nucl 8,  plas 1,  golg_plas 1  (predict for XP_040935211.1)
cyto 4,  nucl 3,  cysk 1,  nucl_plas 1  (predict for XP_040935212.1)
cyto 5,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_040935213.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016678801.1)
other 8  (predict for XP_040935211.1)
other 7,  scret 5  (predict for XP_040935212.1)
other 7,  scret 5  (predict for XP_040935213.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ghi-r.1
for
107897743


ghi-r.1
for
107924491


ghi-r.1
for
107933943


ghi-r.1
for
107951657


gma-u.5
for
100796035



Ortholog ID: 16495
Species ghi ghi ghi gma
Symbol LOC107924491 LOC121221141 LOC121226517 LOC100796035
Function* transcription elongation factor SPT6-like transcription elongation factor SPT6 homolog transcription elongation factor SPT6 homolog transcription elongation factor SPT6 homolog
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107924491 121221141 121226517 100796035
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