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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107897930   reticulon-like protein B16 
 ghi-r.1   107916273   reticulon-like protein B16 
 ath-u.5   AT3G10915   Reticulon family protein 
 bra-r.6   103870421   reticulon-like protein B16 
 bra-r.6   103847229   reticulon-like protein B16 
 bna-r.1   106418415   reticulon-like protein B16 
 bna-r.1   106452634   reticulon-like protein B16 
 bna-r.1   106452719   reticulon-like protein B16 
 cit-r.1   102615254   reticulon-like protein B16 
 gma-u.5   100776896   reticulon-like protein B16-like 
 gma-u.5   100776757   reticulon-like protein B16 
 vvi-u.5   100255297   reticulon-like protein B16 
 ppo-u.5   7455232   reticulon-like protein B16 
 mtr-u.5   11414471   reticulon-like protein B16 
 sly-u.5   101255798   reticulon-like protein B16 
 sot-r.1   102582564   reticulon-like protein B16 
 nta-r.1   107779120   reticulon-like protein B16 
 nta-r.1   107815381   reticulon-like protein B16 
 osa-u.5   4332765   reticulon-like protein B16 
 zma-u.5   100283018   seed maturation protein 
 tae-r.2   123097539   reticulon-like protein B16 
 tae-r.2   123090109   reticulon-like protein B2 
 tae-r.2   123083777   reticulon-like protein B16 
 hvu-r.1   123448699   reticulon-like protein B16 
 sbi-r.1   8082332   reticulon-like protein B16 
 bdi-r.1   100838442   reticulon-like protein B16 

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Top 50 coexpressed genes to 107897930 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107897930 (ghi-r.1 coexpression data)

CoexMap"107897930"


ghiLOC107897930 | Entrez gene ID : 107897930    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 2 3 1 2 1 1 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_016679026.1 [sequence] [blastp]
XP_040933803.1 [sequence] [blastp]
XP_040933804.1 [sequence] [blastp]
XP_040933805.1 [sequence] [blastp]
XP_040933806.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 4,  vacu 3,  golg_plas 3  (predict for XP_016679026.1)
plas 5,  vacu 1,  golg 1,  cyto 1,  extr 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_040933803.1)
plas 5,  vacu 1,  golg 1,  cyto 1,  extr 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_040933804.1)
plas 4,  vacu 3,  golg_plas 3  (predict for XP_040933805.1)
plas 6,  vacu 1,  golg 1,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_040933806.1)
Subcellular
localization
TargetP
other 9  (predict for XP_016679026.1)
other 8  (predict for XP_040933803.1)
other 8  (predict for XP_040933804.1)
other 9  (predict for XP_040933805.1)
other 8  (predict for XP_040933806.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107897930
ghi-r.1
for
107916273
ath-u.5
for
AT3G10915
bra-r.6
for
103870421
bra-r.6
for
103847229
bna-r.1
for
106418415
bna-r.1
for
106452634
bna-r.1
for
106452719
cit-r.1
for
102615254
gma-u.5
for
100776896
gma-u.5
for
100776757
vvi-u.5
for
100255297
ppo-u.5
for
7455232
mtr-u.5
for
11414471
sly-u.5
for
101255798
sot-r.1
for
102582564
nta-r.1
for
107779120
nta-r.1
for
107815381
osa-u.5
for
4332765
zma-u.5
for
100283018
tae-r.2
for
123097539
tae-r.2
for
123090109
tae-r.2
for
123083777
hvu-r.1
for
123448699
sbi-r.1
for
8082332
bdi-r.1
for
100838442


Ortholog ID: 8933
Species ghi ghi ath bra bra bna bna bna cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC107897930 LOC107916273 AT3G10915 LOC103870421 LOC103847229 LOC106418415 LOC106452634 LOC106452719 LOC102615254 LOC100776896 LOC100776757 LOC100255297 LOC7455232 LOC11414471 LOC101255798 LOC102582564 LOC107779120 LOC107815381 LOC4332765 LOC100283018 LOC123097539 LOC123090109 LOC123083777 LOC123448699 LOC8082332 LOC100838442
Function* reticulon-like protein B16 reticulon-like protein B16 Reticulon family protein reticulon-like protein B16 reticulon-like protein B16 reticulon-like protein B16 reticulon-like protein B16 reticulon-like protein B16 reticulon-like protein B16 reticulon-like protein B16-like reticulon-like protein B16 reticulon-like protein B16 reticulon-like protein B16 reticulon-like protein B16 reticulon-like protein B16 reticulon-like protein B16 reticulon-like protein B16 reticulon-like protein B16 reticulon-like protein B16 seed maturation protein reticulon-like protein B16 reticulon-like protein B2 reticulon-like protein B16 reticulon-like protein B16 reticulon-like protein B16 reticulon-like protein B16
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
ghi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 2
ppo04142 Lysosome 2
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 3
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 2
nta00100 Steroid biosynthesis 2
nta00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00270 Cysteine and methionine metabolism 2
osa04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma03083 Polycomb repressive complex 2
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 2
tae04120 Ubiquitin mediated proteolysis 2
tae04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107897930 107916273 820262 103870421 103847229 106418415 106452634 106452719 102615254 100776896 100776757 100255297 7455232 11414471 101255798 102582564 107779120 107815381 4332765 100283018 123097539 123090109 123083777 123448699 8082332 100838442
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