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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107898012   ras-related protein Rab7 
 ghi-r.1   121217875   ras-related protein Rab7 
 ghi-r.1   107957510   ras-related protein Rab7 
 ghi-r.1   107945511   ras-related protein Rab7 
 ath-u.5   RAB7A   RAB GTPase homolog 7A 
 ath-u.5   RABG3A   RAB GTPase homolog G3A 
 ath-u.5   RABG3B   RAB GTPase homolog G3B 
 bra-r.6   103858535   ras-related protein RABG3a 
 bra-r.6   103864302   ras-related protein RABG2 
 bra-r.6   103835692   ras-related protein RABG3b 
 bna-r.1   106420672   ras-related protein RABG2 
 bna-r.1   106374425   ras-related protein RABG2 
 bna-r.1   106423535   ras-related protein RABG3a 
 cit-r.1   102613154   ras-related protein Rab7 
 gma-u.5   100785104   ras-related protein Rab7 
 gma-u.5   100499740   uncharacterized LOC100499740 
 vvi-u.5   100252781   ras-related protein Rab7 
 ppo-u.5   7468752   ras-related protein Rab7 
 ppo-u.5   7464784   ras-related protein Rab7 
 mtr-u.5   112417794   ras-related protein Rab7 
 mtr-u.5   25485026   ras-related protein Rab7 
 mtr-u.5   11436176   ras-related protein Rab7 
 sly-u.5   101257955   ras-related protein Rab7 
 sot-r.1   102604562   ras-related protein Rab7 
 nta-r.1   107807915   ras-related protein Rab7 
 nta-r.1   107762673   ras-related protein Rab7-like 
 nta-r.1   107787247   ras-related protein Rab7 
 osa-u.5   4339450   ras-related protein Rab7 
 osa-u.5   4325946   ras-related protein Rab7 
 zma-u.5   103630662   ras-related protein Rab7 
 zma-u.5   100193973   uncharacterized LOC100193973 
 tae-r.2   123070360   ras-related protein Rab7 
 tae-r.2   123078809   ras-related protein Rab7 
 tae-r.2   123097097   ras-related protein Rab7 
 hvu-r.1   123448354   ras-related protein Rab7-like 
 hvu-r.1   123444266   ras-related protein Rab7-like 
 sbi-r.1   8069790   ras-related protein Rab7 
 bdi-r.1   100831841   ras-related protein Rab7 
 bdi-r.1   100821204   ras-related protein Rab7 

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Top 50 coexpressed genes to 107898012 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107898012 (ghi-r.1 coexpression data)

CoexMap"107898012"


ghiLOC107898012 | Entrez gene ID : 107898012    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 1 2 1 2 3 1 1 3 2 2 3 2 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi04144 [list] [network] Endocytosis (463 genes)
ghi04145 [list] [network] Phagosome (280 genes)
ghi04148 [list] [network] Efferocytosis (152 genes)
GO BP
GO CC
GO:0005774 [list] [network] vacuolar membrane  (246 genes)  IEA  
GO MF
GO:0003924 [list] [network] GTPase activity  (613 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (687 genes)  IEA  
Protein XP_016679065.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  plas 2,  cyto 1  (predict for XP_016679065.1)
Subcellular
localization
TargetP
other 5,  scret 4  (predict for XP_016679065.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107898012
ghi-r.1
for
121217875
ghi-r.1
for
107957510
ghi-r.1
for
107945511
ath-u.5
for
RAB7A
ath-u.5
for
RABG3A
ath-u.5
for
RABG3B
bra-r.6
for
103858535
bra-r.6
for
103864302
bra-r.6
for
103835692
bna-r.1
for
106420672
bna-r.1
for
106374425
bna-r.1
for
106423535
cit-r.1
for
102613154
gma-u.5
for
100785104
gma-u.5
for
100499740
vvi-u.5
for
100252781
ppo-u.5
for
7468752
ppo-u.5
for
7464784
mtr-u.5
for
112417794
mtr-u.5
for
25485026
mtr-u.5
for
11436176
sly-u.5
for
101257955
sot-r.1
for
102604562
nta-r.1
for
107807915
nta-r.1
for
107762673
nta-r.1
for
107787247
osa-u.5
for
4339450
osa-u.5
for
4325946
zma-u.5
for
103630662
zma-u.5
for
100193973
tae-r.2
for
123070360
tae-r.2
for
123078809
tae-r.2
for
123097097
hvu-r.1
for
123448354
hvu-r.1
for
123444266
sbi-r.1
for
8069790
bdi-r.1
for
100831841
bdi-r.1
for
100821204


Ortholog ID: 3303
Species ghi ghi ghi ath ath ath bra bra bra bna bna bna cit gma vvi ppo ppo mtr mtr mtr sly sot nta nta nta osa osa zma zma tae tae tae hvu hvu sbi bdi bdi
Symbol LOC107957510 LOC107945511 LOC107910477 RAB7A RABG3A RABG3B LOC103858535 LOC103864302 LOC103835692 LOC106420672 LOC106374425 LOC106434191 LOC102613154 LOC100499740 LOC100252781 LOC7468752 LOC7464784 LOC112417794 LOC11436176 LOC25481755 LOC101257955 LOC102604562 LOC107807915 LOC107787247 LOC107764770 LOC4339450 LOC4325946 LOC103630662 LOC100193973 LOC123097097 LOC101290584 LOC123174228 LOC123448354 LOC123444266 LOC8069790 LOC100831841 LOC100821204
Function* ras-related protein Rab7 ras-related protein Rab7 ras-related protein Rab7 RAB GTPase homolog 7A RAB GTPase homolog G3A RAB GTPase homolog G3B ras-related protein RABG3a ras-related protein RABG2 ras-related protein RABG3b ras-related protein RABG2 ras-related protein RABG2 ras-related protein RABG3b ras-related protein Rab7 uncharacterized LOC100499740 ras-related protein Rab7 ras-related protein Rab7 ras-related protein Rab7 ras-related protein Rab7 ras-related protein Rab7 ras-related protein Rab7 ras-related protein Rab7 ras-related protein Rab7 ras-related protein Rab7 ras-related protein Rab7 ras-related protein Rab7-like ras-related protein Rab7 ras-related protein Rab7 ras-related protein Rab7 uncharacterized LOC100193973 ras-related protein Rab7 ras-related protein Rab7 ras-related protein Rab7 ras-related protein Rab7-like ras-related protein Rab7-like ras-related protein Rab7 ras-related protein Rab7 ras-related protein Rab7
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 6
ghi04145 Phagosome 6
ghi04148 Efferocytosis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 6
ghi04145 Phagosome 6
ghi04148 Efferocytosis 6
ghi00010 Glycolysis / Gluconeogenesis 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 3
ath04141 Protein processing in endoplasmic reticulum 2
ath04145 Phagosome 2
ath04148 Efferocytosis 2
ath03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 3
bra04145 Phagosome 3
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 2
bra04145 Phagosome 2
bra04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 3
bra04145 Phagosome 2
bra04148 Efferocytosis 2
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 2
bna04145 Phagosome 2
bna04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 2
bna04145 Phagosome 2
bna04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 2
bna04145 Phagosome 2
bna04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 3
cit04144 Endocytosis 3
cit04145 Phagosome 2
cit03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 4
gma00230 Purine metabolism 2
gma00730 Thiamine metabolism 2
gma01232 Nucleotide metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 7
mtr01230 Biosynthesis of amino acids 4
mtr00020 Citrate cycle (TCA cycle) 4
mtr04148 Efferocytosis 3
mtr00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00040 Pentose and glucuronate interconversions 3
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 7
mtr01230 Biosynthesis of amino acids 4
mtr00020 Citrate cycle (TCA cycle) 4
mtr04148 Efferocytosis 3
mtr00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 3
sly04142 Lysosome 2
sly00190 Oxidative phosphorylation 2
sly04016 MAPK signaling pathway - plant 2
sly04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 4
sot04142 Lysosome 3
sot03013 Nucleocytoplasmic transport 2
sot03015 mRNA surveillance pathway 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04145 Phagosome 6
nta04144 Endocytosis 4
nta04148 Efferocytosis 4
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04145 Phagosome 6
nta04144 Endocytosis 4
nta04148 Efferocytosis 4
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04145 Phagosome 6
nta04144 Endocytosis 4
nta04148 Efferocytosis 4
nta04142 Lysosome 3
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03060 Protein export 4
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01232 Nucleotide metabolism 4
zma01240 Biosynthesis of cofactors 4
zma00230 Purine metabolism 3
zma00730 Thiamine metabolism 3
zma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae04145 Phagosome 3
tae04148 Efferocytosis 3
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 4
tae04145 Phagosome 3
tae04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 6
tae04144 Endocytosis 3
tae04145 Phagosome 3
tae04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 10
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 4
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 4
bdi04382 Cornified envelope formation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107957510 107945511 107910477 816724 826558 838880 103858535 103864302 103835692 106420672 106374425 106434191 102613154 100499740 100252781 7468752 7464784 112417794 11436176 25481755 101257955 102604562 107807915 107787247 107764770 4339450 4325946 103630662 100193973 123097097 101290584 123174228 123448354 123444266 8069790 100831841 100821204
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