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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107898491   succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial 
 ath-u.5   SDH2-1   succinate dehydrogenase 2-1 
 ath-u.5   SDH2-2   succinate dehydrogenase 2-2 
 ath-u.5   SDH2-3   succinate dehydrogenase 2-3 
 gma-u.5   100815377   succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial 
 gma-u.5   102661752   succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial 
 gma-u.5   100796630   succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial 
 vvi-u.5   100262907   succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial 
 vvi-u.5   100244487   succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial 
 ppo-u.5   7456195   succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial 
 mtr-u.5   25479657   succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial 
 sly-u.5   100736507   succinate dehydrogenase 
 zma-u.5   115874042   Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial-like 
 zma-u.5   109944584   succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial 

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Top 50 coexpressed genes to 107898491 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107898491 (ghi-r.1 coexpression data)

CoexMap"107898491"


ghiLOC107898491 | Entrez gene ID : 107898491    
Species ghi ath gma vvi ppo mtr sly zma hvu bna cit bra osa sbi bdi nta tae cre sot
Paralog 1 3 3 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00020 [list] [network] Citrate cycle (TCA cycle) (143 genes)
ghi00190 [list] [network] Oxidative phosphorylation (393 genes)
ghi01200 [list] [network] Carbon metabolism (681 genes)
GO BP
GO:0006099 [list] [network] tricarboxylic acid cycle  (119 genes)  IEA  
GO:0022904 [list] [network] respiratory electron transport chain  (123 genes)  IEA  
GO:0009060 [list] [network] aerobic respiration  (417 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (1525 genes)  IEA  
GO MF
GO:0051537 [list] [network] 2 iron, 2 sulfur cluster binding  (94 genes)  IEA  
GO:0009055 [list] [network] electron transfer activity  (219 genes)  IEA  
Protein XP_016679444.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  cyto_mito 4,  chlo 3  (predict for XP_016679444.1)
Subcellular
localization
TargetP
mito 6,  chlo 4  (predict for XP_016679444.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107898491
ath-u.5
for
SDH2-1
ath-u.5
for
SDH2-2
ath-u.5
for
SDH2-3
gma-u.5
for
100815377
gma-u.5
for
102661752
gma-u.5
for
100796630
vvi-u.5
for
100262907
vvi-u.5
for
100244487
ppo-u.5
for
7456195
mtr-u.5
for
25479657
sly-u.5
for
100736507
zma-u.5
for
115874042
zma-u.5
for
109944584


Ortholog ID: 3018
Species ghi ghi ath ath bra bra bna bna cit cit gma gma vvi vvi ppo mtr sot nta nta zma zma tae tae bdi cre
Symbol LOC107957094 LOC107898491 SDH2-2 SDH2-3 LOC103836989 LOC103875224 LOC111198745 LOC106401863 LOC102626819 LOC102624270 LOC100815377 LOC102661752 LOC100244487 LOC100262907 LOC7456195 LOC25479657 LOC102589264 LOC107802674 LOC107801918 LOC109944584 LOC115874042 LOC123124739 LOC123106994 LOC100839755 CHLRE_06g264200v5
Function* succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial succinate dehydrogenase 2-2 succinate dehydrogenase 2-3 succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial-like succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00020 Citrate cycle (TCA cycle) 4
ghi00190 Oxidative phosphorylation 4
ghi01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00020 Citrate cycle (TCA cycle) 4
ghi00190 Oxidative phosphorylation 4
ghi01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 7
ath01200 Carbon metabolism 4
ath00020 Citrate cycle (TCA cycle) 3
ath00053 Ascorbate and aldarate metabolism 2
ath00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 3
bra00010 Glycolysis / Gluconeogenesis 2
bra00030 Pentose phosphate pathway 2
bra00051 Fructose and mannose metabolism 2
bra00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 6
bra00020 Citrate cycle (TCA cycle) 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 8
bna00190 Oxidative phosphorylation 8
bna01200 Carbon metabolism 8
bna00230 Purine metabolism 2
bna00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 8
bna00190 Oxidative phosphorylation 8
bna01200 Carbon metabolism 8
bna00230 Purine metabolism 2
bna00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 6
cit01230 Biosynthesis of amino acids 6
cit00190 Oxidative phosphorylation 6
cit00010 Glycolysis / Gluconeogenesis 4
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 11
gma00020 Citrate cycle (TCA cycle) 4
gma01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 3
vvi04141 Protein processing in endoplasmic reticulum 3
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 6
vvi00020 Citrate cycle (TCA cycle) 4
vvi00190 Oxidative phosphorylation 4
vvi01210 2-Oxocarboxylic acid metabolism 3
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 11
ppo04145 Phagosome 5
ppo00020 Citrate cycle (TCA cycle) 2
ppo01200 Carbon metabolism 2
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 11
mtr00020 Citrate cycle (TCA cycle) 5
mtr01200 Carbon metabolism 5
mtr04142 Lysosome 2
mtr04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 5
sot00020 Citrate cycle (TCA cycle) 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 9
nta01200 Carbon metabolism 9
nta00020 Citrate cycle (TCA cycle) 7
nta00010 Glycolysis / Gluconeogenesis 5
nta00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 10
nta01200 Carbon metabolism 10
nta00020 Citrate cycle (TCA cycle) 8
nta00010 Glycolysis / Gluconeogenesis 6
nta00620 Pyruvate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 7
zma00020 Citrate cycle (TCA cycle) 5
zma01200 Carbon metabolism 5
zma01210 2-Oxocarboxylic acid metabolism 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00020 Citrate cycle (TCA cycle) 11
cre01200 Carbon metabolism 11
cre01210 2-Oxocarboxylic acid metabolism 4
cre00190 Oxidative phosphorylation 3
cre00785 Lipoic acid metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107957094 107898491 834065 836640 103836989 103875224 111198745 106401863 102626819 102624270 100815377 102661752 100244487 100262907 7456195 25479657 102589264 107802674 107801918 109944584 115874042 123124739 123106994 100839755 5721979
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