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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107898601   serine acetyltransferase 1, chloroplastic 
 ghi-r.1   107918549   serine acetyltransferase 1, chloroplastic 
 ghi-r.1   107917840   serine acetyltransferase 1, chloroplastic 
 ghi-r.1   107922331   serine acetyltransferase 1, chloroplastic 
 ath-u.5   SERAT2;2   serine acetyltransferase 2;2 
 ath-u.5   SERAT2;1   serine acetyltransferase 2;1 
 bra-r.6   103868374   serine acetyltransferase 1, chloroplastic 
 bra-r.6   103870196   serine acetyltransferase 3, mitochondrial 
 bra-r.6   103871006   serine acetyltransferase 1, chloroplastic 
 bna-r.1   106354107   serine acetyltransferase 1, chloroplastic 
 bna-r.1   106452342   serine acetyltransferase 3, mitochondrial-like 
 bna-r.1   106429085   serine acetyltransferase 1, chloroplastic-like 
 cit-r.1   102615316   serine acetyltransferase 1, chloroplastic-like 
 gma-u.5   SAT1   serine O-acetyltransferase 1 
 gma-u.5   100820316   serine acetyltransferase 1, chloroplastic 
 gma-u.5   100806181   serine acetyltransferase 1, chloroplastic 
 vvi-u.5   100260128   serine acetyltransferase 1, chloroplastic 
 vvi-u.5   100246391   serine acetyltransferase 1, chloroplastic 
 ppo-u.5   7485103   serine acetyltransferase 1, chloroplastic 
 mtr-u.5   25489102   serine acetyltransferase 1, chloroplastic 
 mtr-u.5   11436677   serine acetyltransferase 1, chloroplastic 
 sly-u.5   101257583   serine acetyltransferase 1, chloroplastic-like 
 sly-u.5   101245503   serine acetyltransferase 1, chloroplastic 
 sot-r.1   102595199   serine acetyltransferase 1, chloroplastic 
 sot-r.1   102605877   serine acetyltransferase 1, chloroplastic-like 
 nta-r.1   107803065   serine acetyltransferase 1, chloroplastic-like 
 nta-r.1   107808059   serine acetyltransferase 1, chloroplastic 
 nta-r.1   107760267   serine acetyltransferase 1, chloroplastic 

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Top 50 coexpressed genes to 107898601 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107898601 (ghi-r.1 coexpression data)

CoexMap"107898601"


ghiLOC107898601 | Entrez gene ID : 107898601    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta zma cre sbi tae osa hvu bdi
Paralog 4 2 3 3 1 3 2 1 2 2 2 3 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00270 [list] [network] Cysteine and methionine metabolism (291 genes)
ghi00543 [list] [network] Exopolysaccharide biosynthesis (8 genes)
ghi00920 [list] [network] Sulfur metabolism (83 genes)
ghi01200 [list] [network] Carbon metabolism (681 genes)
ghi01230 [list] [network] Biosynthesis of amino acids (568 genes)
GO BP
GO:0006535 [list] [network] cysteine biosynthetic process from serine  (26 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (2580 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (13864 genes)  IEA  
GO MF
GO:0009001 [list] [network] serine O-acetyltransferase activity  (8 genes)  IEA  
Protein XP_016679590.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 1,  chlo 1,  pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_016679590.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_016679590.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107898601
ghi-r.1
for
107918549
ghi-r.1
for
107917840
ghi-r.1
for
107922331
ath-u.5
for
SERAT2;2
ath-u.5
for
SERAT2;1
bra-r.6
for
103868374
bra-r.6
for
103870196
bra-r.6
for
103871006
bna-r.1
for
106354107
bna-r.1
for
106452342
bna-r.1
for
106429085
cit-r.1
for
102615316
gma-u.5
for
SAT1
gma-u.5
for
100820316
gma-u.5
for
100806181
vvi-u.5
for
100260128
vvi-u.5
for
100246391
ppo-u.5
for
7485103
mtr-u.5
for
25489102
mtr-u.5
for
11436677
sly-u.5
for
101257583
sly-u.5
for
101245503
sot-r.1
for
102595199
sot-r.1
for
102605877
nta-r.1
for
107803065
nta-r.1
for
107808059
nta-r.1
for
107760267


Ortholog ID: 5507
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit gma gma gma vvi vvi ppo mtr mtr sly sly sot sot nta nta nta
Symbol LOC107918549 LOC107917840 LOC107922331 SERAT2;2 SERAT2;1 LOC103868374 LOC103871006 LOC103832545 LOC106412334 LOC106412042 LOC106396443 LOC102615316 SAT1 LOC100820316 LOC100806181 LOC100260128 LOC100246391 LOC7485103 LOC25489102 LOC11436677 LOC101257583 LOC101245503 LOC102595199 LOC102605877 LOC107808059 LOC107760267 LOC107796342
Function* serine acetyltransferase 1, chloroplastic serine acetyltransferase 1, chloroplastic serine acetyltransferase 1, chloroplastic serine acetyltransferase 2;2 serine acetyltransferase 2;1 serine acetyltransferase 1, chloroplastic serine acetyltransferase 1, chloroplastic serine acetyltransferase 1, chloroplastic serine acetyltransferase 1, chloroplastic-like serine acetyltransferase 1, chloroplastic serine acetyltransferase 1, chloroplastic serine acetyltransferase 1, chloroplastic-like serine O-acetyltransferase 1 serine acetyltransferase 1, chloroplastic serine acetyltransferase 1, chloroplastic serine acetyltransferase 1, chloroplastic serine acetyltransferase 1, chloroplastic serine acetyltransferase 1, chloroplastic serine acetyltransferase 1, chloroplastic serine acetyltransferase 1, chloroplastic serine acetyltransferase 1, chloroplastic-like serine acetyltransferase 1, chloroplastic serine acetyltransferase 1, chloroplastic serine acetyltransferase 1, chloroplastic-like serine acetyltransferase 1, chloroplastic serine acetyltransferase 1, chloroplastic serine acetyltransferase 1, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 4
ghi00543 Exopolysaccharide biosynthesis 4
ghi00920 Sulfur metabolism 4
ghi01200 Carbon metabolism 4
ghi01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 4
ghi00543 Exopolysaccharide biosynthesis 4
ghi00920 Sulfur metabolism 4
ghi01200 Carbon metabolism 4
ghi01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 4
ghi00543 Exopolysaccharide biosynthesis 4
ghi00920 Sulfur metabolism 4
ghi01200 Carbon metabolism 4
ghi01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00920 Sulfur metabolism 9
ath01320 Sulfur cycle 6
ath00966 Glucosinolate biosynthesis 4
ath00230 Purine metabolism 4
ath00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00380 Tryptophan metabolism 6
bra00966 Glucosinolate biosynthesis 6
bra01210 2-Oxocarboxylic acid metabolism 6
bra01230 Biosynthesis of amino acids 3
bra00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00910 Nitrogen metabolism 4
bra01310 Nitrogen cycle 4
bra00270 Cysteine and methionine metabolism 3
bra00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 7
bna00543 Exopolysaccharide biosynthesis 7
bna00920 Sulfur metabolism 7
bna01200 Carbon metabolism 7
bna01230 Biosynthesis of amino acids 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 7
bna00543 Exopolysaccharide biosynthesis 7
bna00920 Sulfur metabolism 7
bna01200 Carbon metabolism 7
bna01230 Biosynthesis of amino acids 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 7
bna00543 Exopolysaccharide biosynthesis 7
bna00920 Sulfur metabolism 7
bna01200 Carbon metabolism 7
bna01230 Biosynthesis of amino acids 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 5
gma01230 Biosynthesis of amino acids 5
gma00270 Cysteine and methionine metabolism 3
gma00543 Exopolysaccharide biosynthesis 3
gma00920 Sulfur metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 8
gma00270 Cysteine and methionine metabolism 2
gma00543 Exopolysaccharide biosynthesis 2
gma00920 Sulfur metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00480 Glutathione metabolism 5
gma01230 Biosynthesis of amino acids 5
gma04712 Circadian rhythm - plant 4
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
gma00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00592 alpha-Linolenic acid metabolism 2
vvi01230 Biosynthesis of amino acids 2
vvi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00270 Cysteine and methionine metabolism 2
mtr00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00480 Glutathione metabolism 5
sly00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00920 Sulfur metabolism 5
sot00270 Cysteine and methionine metabolism 3
sot01200 Carbon metabolism 3
sot01230 Biosynthesis of amino acids 3
sot01320 Sulfur cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00920 Sulfur metabolism 6
sot01240 Biosynthesis of cofactors 4
sot01320 Sulfur cycle 4
sot00261 Monobactam biosynthesis 3
sot00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 6
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
nta00940 Phenylpropanoid biosynthesis 3
nta00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 6
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
nta00270 Cysteine and methionine metabolism 2
nta00543 Exopolysaccharide biosynthesis 2
nta00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 2
nta00073 Cutin, suberine and wax biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
nta00941 Flavonoid biosynthesis 2
nta00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107918549 107917840 107922331 820499 842043 103868374 103871006 103832545 106412334 106412042 106396443 102615316 606507 100820316 100806181 100260128 100246391 7485103 25489102 11436677 101257583 101245503 102595199 102605877 107808059 107760267 107796342
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