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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107898743   pentatricopeptide repeat-containing protein At1g77360, mitochondrial 
 ghi-r.1   121202855   pentatricopeptide repeat-containing protein At1g77360, mitochondrial 
 cit-r.1   102614236   pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like 
 gma-u.5   100796114   pentatricopeptide repeat-containing protein At1g77360, mitochondrial 
 vvi-u.5   109121403   pentatricopeptide repeat-containing protein At1g77360, mitochondrial 
 ppo-u.5   7478184   pentatricopeptide repeat-containing protein At1g71060, mitochondrial 
 osa-u.5   4336423   pentatricopeptide repeat-containing protein At3g22670, mitochondrial 
 zma-u.5   100276413   uncharacterized LOC100276413 
 zma-u.5   103653005   pentatricopeptide repeat-containing protein At1g77360, mitochondrial 
 tae-r.2   123189870   pentatricopeptide repeat-containing protein At1g77360, mitochondrial 
 tae-r.2   123053975   pentatricopeptide repeat-containing protein At1g77360, mitochondrial 
 tae-r.2   123046094   pentatricopeptide repeat-containing protein At1g77360, mitochondrial 
 hvu-r.1   123427263   pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like 
 sbi-r.1   8056017   pentatricopeptide repeat-containing protein At1g77360, mitochondrial 
 bdi-r.1   100821875   pentatricopeptide repeat-containing protein At1g77360, mitochondrial 

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Top 50 coexpressed genes to 107898743 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107898743 (ghi-r.1 coexpression data)

CoexMap"107898743"


ghiLOC107898743 | Entrez gene ID : 107898743    
Species ghi cit gma vvi ppo osa zma tae hvu sbi bdi sot sly nta bna cre mtr ath bra
Paralog 2 1 1 1 1 1 2 3 1 1 1 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031930 [list] [network] mitochondria-nucleus signaling pathway  (21 genes)  IEA  
GO:0010019 [list] [network] chloroplast-nucleus signaling pathway  (25 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1647 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_040967734.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 3,  cyto_pero 3  (predict for XP_040967734.1)
Subcellular
localization
TargetP
chlo 7,  other 5  (predict for XP_040967734.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107898743
ghi-r.1
for
121202855
cit-r.1
for
102614236
gma-u.5
for
100796114
vvi-u.5
for
109121403
ppo-u.5
for
7478184
osa-u.5
for
4336423
zma-u.5
for
100276413
zma-u.5
for
103653005
tae-r.2
for
123189870
tae-r.2
for
123053975
tae-r.2
for
123046094
hvu-r.1
for
123427263
sbi-r.1
for
8056017
bdi-r.1
for
100821875


Ortholog ID: 13245
Species ghi ghi cit gma vvi ppo osa zma zma tae tae tae hvu sbi bdi
Symbol LOC107898743 LOC121202855 LOC102614236 LOC100796114 LOC109121403 LOC7478184 LOC4336423 LOC100276413 LOC103653005 LOC123189870 LOC123053975 LOC123046094 LOC123427263 LOC8056017 LOC100821875
Function* pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g71060, mitochondrial pentatricopeptide repeat-containing protein At3g22670, mitochondrial uncharacterized LOC100276413 pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00510 N-Glycan biosynthesis 5
gma00513 Various types of N-glycan biosynthesis 5
gma04141 Protein processing in endoplasmic reticulum 5
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma03018 RNA degradation 2
zma03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107898743 121202855 102614236 100796114 109121403 7478184 4336423 100276413 103653005 123189870 123053975 123046094 123427263 8056017 100821875
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