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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107898900   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 ghi-r.1   121228238   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 bra-r.6   103875378   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 cit-r.1   102611024   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 gma-u.5   100781186   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 vvi-u.5   100265928   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 mtr-u.5   25493359   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 sly-u.5   101268085   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 sot-r.1   102600758   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 nta-r.1   107774061   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 nta-r.1   107813706   pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like 
 osa-u.5   4341020   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 zma-u.5   103642143   Pentatricopeptide repeat-containing protein mitochondrial 
 bdi-r.1   100838804   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 

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Top 50 coexpressed genes to 107898900 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107898900 (ghi-r.1 coexpression data)

CoexMap"107898900"


ghiLOC107898900 | Entrez gene ID : 107898900    
Species ghi bra cit gma vvi mtr sly sot nta osa zma bdi tae bna ppo cre sbi ath hvu
Paralog 2 1 1 1 1 1 1 1 2 1 1 1 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (557 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (14879 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (1753 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016679960.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 4,  vacu 1  (predict for XP_016679960.2)
Subcellular
localization
TargetP
chlo 7,  mito 5  (predict for XP_016679960.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107898900
ghi-r.1
for
121228238
bra-r.6
for
103875378
cit-r.1
for
102611024
gma-u.5
for
100781186
vvi-u.5
for
100265928
mtr-u.5
for
25493359
sly-u.5
for
101268085
sot-r.1
for
102600758
nta-r.1
for
107774061
nta-r.1
for
107813706
osa-u.5
for
4341020
zma-u.5
for
103642143
bdi-r.1
for
100838804


Ortholog ID: 11230
Species ghi ghi bra cit gma vvi mtr sly sot nta nta osa zma bdi
Symbol LOC107898900 LOC121228238 LOC103875378 LOC102611024 LOC100781186 LOC100265928 LOC25493359 LOC101268085 LOC102600758 LOC107774061 LOC107813706 LOC4341020 LOC103642143 LOC100838804
Function* pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like pentatricopeptide repeat-containing protein At2g03880, mitochondrial Pentatricopeptide repeat-containing protein mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 2
mtr04144 Endocytosis 2
mtr04626 Plant-pathogen interaction 2
mtr04145 Phagosome 2
mtr04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 4
sly00510 N-Glycan biosynthesis 3
sly04016 MAPK signaling pathway - plant 2
sly04075 Plant hormone signal transduction 2
sly00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
nta04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03450 Non-homologous end-joining 2
nta04136 Autophagy - other 2
nta04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107898900 121228238 103875378 102611024 100781186 100265928 25493359 101268085 102600758 107774061 107813706 4341020 103642143 100838804
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