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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107899167   flowering locus K homology domain 
 ghi-r.1   107926815   flowering locus K homology domain 
 ghi-r.1   107924531   flowering locus K homology domain 
 ghi-r.1   107924215   flowering locus K homology domain 
 ath-u.5   FLK   RNA-binding KH domain-containing protein 
 bra-r.6   103859040   flowering locus K homology domain 
 bna-r.1   106447638   flowering locus K homology domain 
 bna-r.1   106438987   flowering locus K homology domain-like 
 cit-r.1   102628082   flowering locus K homology domain 
 gma-u.5   100819415   K homology RNA-binding domain-containing protein 
 gma-u.5   100818363   flowering locus K homology domain 
 gma-u.5   100813235   flowering locus K homology domain 
 vvi-u.5   100266515   flowering locus K homology domain 
 vvi-u.5   100242733   flowering locus K homology domain 
 ppo-u.5   7487684   flowering locus K homology domain 
 ppo-u.5   18098996   flowering locus K homology domain 
 mtr-u.5   25499691   flowering locus K homology domain 
 mtr-u.5   25484325   flowering locus K homology domain 
 sly-u.5   101258566   flowering locus K homology domain-like 
 sly-u.5   101254532   flowering locus K homology domain 
 sly-u.5   101245397   flowering locus K homology domain-like 
 sot-r.1   102603164   flowering locus K homology domain 
 sot-r.1   102589032   flowering locus K homology domain-like 
 sot-r.1   102603965   flowering locus K homology domain-like 
 nta-r.1   107779259   flowering locus K homology domain 
 nta-r.1   107784948   flowering locus K homology domain 
 nta-r.1   107830755   flowering locus K homology domain 
 osa-u.5   4333505   flowering locus K homology domain 
 osa-u.5   4352707   flowering locus K homology domain-like 
 zma-u.5   100282270   uncharacterized LOC100282270 
 zma-u.5   100285239   uncharacterized LOC100285239 
 tae-r.2   123096066   flowering locus K homology domain 
 tae-r.2   123086923   flowering locus K homology domain 
 tae-r.2   123091055   flowering locus K homology domain 
 hvu-r.1   123447724   flowering locus K homology domain-like 
 hvu-r.1   123396026   flowering locus K homology domain 
 sbi-r.1   8062477   flowering locus K homology domain 
 sbi-r.1   8076634   flowering locus K homology domain 
 bdi-r.1   100821573   flowering locus K homology domain 
 bdi-r.1   100838942   flowering locus K homology domain 

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Top 50 coexpressed genes to 107899167 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107899167 (ghi-r.1 coexpression data)

CoexMap"107899167"


ghiLOC107899167 | Entrez gene ID : 107899167    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 2 1 3 2 2 2 3 3 3 2 2 3 2 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010468 [list] [network] regulation of gene expression  (5166 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (13864 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (890 genes)  IEA  
Protein XP_016680282.2 [sequence] [blastp]
XP_016680283.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 4  (predict for XP_016680282.2)
cyto 6,  nucl 4  (predict for XP_016680283.2)
Subcellular
localization
TargetP
other 8  (predict for XP_016680282.2)
other 8  (predict for XP_016680283.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107899167
ghi-r.1
for
107926815
ghi-r.1
for
107924531
ghi-r.1
for
107924215
ath-u.5
for
FLK
bra-r.6
for
103859040
bna-r.1
for
106447638
bna-r.1
for
106438987
cit-r.1
for
102628082
gma-u.5
for
100819415
gma-u.5
for
100818363
gma-u.5
for
100813235
vvi-u.5
for
100266515
vvi-u.5
for
100242733
ppo-u.5
for
7487684
ppo-u.5
for
18098996
mtr-u.5
for
25499691
mtr-u.5
for
25484325
sly-u.5
for
101258566
sly-u.5
for
101254532
sly-u.5
for
101245397
sot-r.1
for
102603164
sot-r.1
for
102589032
sot-r.1
for
102603965
nta-r.1
for
107779259
nta-r.1
for
107784948
nta-r.1
for
107830755
osa-u.5
for
4333505
osa-u.5
for
4352707
zma-u.5
for
100282270
zma-u.5
for
100285239
tae-r.2
for
123096066
tae-r.2
for
123086923
tae-r.2
for
123091055
hvu-r.1
for
123447724
hvu-r.1
for
123396026
sbi-r.1
for
8062477
sbi-r.1
for
8076634
bdi-r.1
for
100821573
bdi-r.1
for
100838942


Ortholog ID: 3218
Species ghi ghi ghi ath bra bna bna cit gma gma gma vvi vvi ppo ppo mtr mtr sly sly sly sot sot sot nta nta nta osa osa zma zma tae tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC107899167 LOC107926815 LOC107924531 FLK LOC103859040 LOC106447638 LOC106438987 LOC102628082 LOC100808237 LOC100799901 LOC100793728 LOC100266515 LOC100242733 LOC7487684 LOC18098996 LOC25499691 LOC25484325 LOC101258566 LOC101254532 LOC101245397 LOC102603164 LOC102589032 LOC102603965 LOC107779259 LOC107822433 LOC107785621 LOC4333505 LOC4352707 LOC100282270 LOC100285239 LOC123096066 LOC123086923 LOC123110499 LOC123447724 LOC123396026 LOC8062477 LOC8076634 LOC100821573 LOC100838942
Function* flowering locus K homology domain flowering locus K homology domain flowering locus K homology domain RNA-binding KH domain-containing protein flowering locus K homology domain flowering locus K homology domain flowering locus K homology domain-like flowering locus K homology domain flowering locus K homology domain flowering locus K homology domain flowering locus K homology domain flowering locus K homology domain flowering locus K homology domain flowering locus K homology domain flowering locus K homology domain flowering locus K homology domain flowering locus K homology domain flowering locus K homology domain-like flowering locus K homology domain flowering locus K homology domain-like flowering locus K homology domain flowering locus K homology domain-like flowering locus K homology domain-like flowering locus K homology domain flowering locus K homology domain flowering locus K homology domain flowering locus K homology domain flowering locus K homology domain-like uncharacterized LOC100282270 uncharacterized LOC100285239 flowering locus K homology domain flowering locus K homology domain flowering locus K homology domain flowering locus K homology domain-like flowering locus K homology domain flowering locus K homology domain flowering locus K homology domain flowering locus K homology domain flowering locus K homology domain
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00541 Biosynthesis of various nucleotide sugars 2
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03013 Nucleocytoplasmic transport 2
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 3
bra03040 Spliceosome 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 3
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 3
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
gma04120 Ubiquitin mediated proteolysis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
gma00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
gma04120 Ubiquitin mediated proteolysis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 4
ppo03040 Spliceosome 3
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 2
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
ppo03040 Spliceosome 2
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 4
mtr00230 Purine metabolism 3
mtr00250 Alanine, aspartate and glutamate metabolism 3
mtr00240 Pyrimidine metabolism 3
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
sly03013 Nucleocytoplasmic transport 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot03015 mRNA surveillance pathway 2
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot04120 Ubiquitin mediated proteolysis 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03083 Polycomb repressive complex 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 5
osa03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03250 Viral life cycle - HIV-1 4
tae03272 Virion - Hepatitis viruses 4
tae04144 Endocytosis 4
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae03040 Spliceosome 3
tae03015 mRNA surveillance pathway 3
tae03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00740 Riboflavin metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 5
sbi03013 Nucleocytoplasmic transport 3
sbi03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107899167 107926815 107924531 819619 103859040 106447638 106438987 102628082 100808237 100799901 100793728 100266515 100242733 7487684 18098996 25499691 25484325 101258566 101254532 101245397 102603164 102589032 102603965 107779259 107822433 107785621 4333505 4352707 100282270 100285239 123096066 123086923 123110499 123447724 123396026 8062477 8076634 100821573 100838942
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