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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107899697   54S ribosomal protein L37, mitochondrial 
 ath-u.5   AT3G01740   Mitochondrial ribosomal protein L37 
 gma-u.5   100527927   putative mitochondrial ribosomal protein L37 
 gma-u.5   100499962   putative mitochondrial ribosomal protein L37 
 vvi-u.5   100252505   large ribosomal subunit protein mL54 
 ppo-u.5   7456209   54S ribosomal protein L37, mitochondrial 
 mtr-u.5   25492786   uncharacterized LOC25492786 
 mtr-u.5   11422251   54S ribosomal protein L37, mitochondrial 
 sly-u.5   101261680   large ribosomal subunit protein mL54-like 
 osa-u.5   4351876   large ribosomal subunit protein mL54 
 zma-u.5   100274625   Mitochondrial ribosomal protein L37 

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Top 50 coexpressed genes to 107899697 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107899697 (ghi-r.1 coexpression data)

CoexMap"107899697"


ghiLOC107899697 | Entrez gene ID : 107899697    
Species ghi ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna
Paralog 1 1 2 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO CC
GO:0005762 [list] [network] mitochondrial large ribosomal subunit  (54 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
Protein XP_016680957.1 [sequence] [blastp]
XP_016680958.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  mito 1  (predict for XP_016680957.1)
chlo 10  (predict for XP_016680958.1)
Subcellular
localization
TargetP
scret 5  (predict for XP_016680957.1)
mito 2  (predict for XP_016680958.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107899697

.
ath-u.5
for
AT3G01740

.
gma-u.5
for
100527927

.
gma-u.5
for
100499962

.
vvi-u.5
for
100252505

.
ppo-u.5
for
7456209

.
mtr-u.5
for
25492786

.
mtr-u.5
for
11422251

.
sly-u.5
for
101261680

.
osa-u.5
for
4351876

.
zma-u.5
for
100274625

.


Ortholog ID: 7213
Species ath gma gma sly osa zma bra vvi ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta
Symbol AT3G01740 LOC100527927 LOC100499962 LOC101261680 LOC4351876 LOC100274625 LOC103858894 LOC100252505 LOC7456209 LOC11422251 LOC25492786 LOC123136270 LOC123106617 LOC123402975 LOC107899697 LOC107914211 BNAC03G32320D BNAA03G27310D CHLRE_12g546000v5 LOC8079374 LOC102587374 LOC102588916 LOC102610537 LOC100844625 LOC107804216
Function* Mitochondrial ribosomal protein L37 putative mitochondrial ribosomal protein L37 putative mitochondrial ribosomal protein L37 large ribosomal subunit protein mL54-like large ribosomal subunit protein mL54 Mitochondrial ribosomal protein L37 uncharacterized LOC103858894 large ribosomal subunit protein mL54 54S ribosomal protein L37, mitochondrial 54S ribosomal protein L37, mitochondrial uncharacterized LOC25492786 54S ribosomal protein L37, mitochondrial 39S ribosomal protein L54, mitochondrial 54S ribosomal protein L37, mitochondrial 54S ribosomal protein L37, mitochondrial 39S ribosomal protein L54, mitochondrial uncharacterized BNAC03G32320D uncharacterized BNAA03G27310D uncharacterized protein 54S ribosomal protein L37, mitochondrial 54S ribosomal protein L37, mitochondrial-like 54S ribosomal protein L37, mitochondrial-like 54S ribosomal protein L37, mitochondrial 54S ribosomal protein L37, mitochondrial large ribosomal subunit protein mL54
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 11
sly00280 Valine, leucine and isoleucine degradation 2
sly00410 beta-Alanine metabolism 2
sly00640 Propanoate metabolism 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
bra03008 Ribosome biogenesis in eukaryotes 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 4
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
mtr03040 Spliceosome 4
mtr00790 Folate biosynthesis 2
mtr01240 Biosynthesis of cofactors 2
mtr04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae00270 Cysteine and methionine metabolism 3
tae00280 Valine, leucine and isoleucine degradation 3
tae00290 Valine, leucine and isoleucine biosynthesis 3
tae00770 Pantothenate and CoA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04130 SNARE interactions in vesicular transport 4
ghi03010 Ribosome 3
ghi00240 Pyrimidine metabolism 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
ghi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 13
sbi04016 MAPK signaling pathway - plant 3
sbi04070 Phosphatidylinositol signaling system 3
sbi04075 Plant hormone signal transduction 3
sbi04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
sot04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 7
bdi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 15
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821088 100527927 100499962 101261680 4351876 100274625 103858894 100252505 7456209 11422251 25492786 123136270 123106617 123402975 107899697 107914211 106388684 106438876 5719578 8079374 102587374 102588916 102610537 100844625 107804216
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