ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107899747	uncharacterized LOC107899747
ghi-r.1	107891594	uncharacterized LOC107891594
ghi-r.1	107948274	uncharacterized LOC107948274
ghi-r.1	107889078	uncharacterized LOC107889078
ath-u.5	AT3G57990	uncharacterized protein
bra-r.6	103841696	uncharacterized LOC103841696
bra-r.6	103863013	uncharacterized LOC103863013
bna-r.1	BNAC04G23860D	uncharacterized BNAC04G23860D
bna-r.1	BNAC08G28920D	uncharacterized BNAC08G28920D
bna-r.1	106368179	uncharacterized LOC106368179
cit-r.1	102630624	uncharacterized LOC102630624
gma-u.5	100797011	uncharacterized LOC100797011
gma-u.5	100796667	uncharacterized LOC100796667
vvi-u.5	100260592	uncharacterized LOC100260592
vvi-u.5	100240833	hypothetical protein
ppo-u.5	7479533	uncharacterized LOC7479533
ppo-u.5	112324476	uncharacterized LOC112324476
mtr-u.5	25483511	uncharacterized LOC25483511
sly-u.5	101262064	uncharacterized LOC101262064
sot-r.1	102595892	uncharacterized LOC102595892
sot-r.1	107062962	uncharacterized LOC107062962
nta-r.1	107760415	uncharacterized LOC107760415
nta-r.1	107818287	uncharacterized LOC107818287
osa-u.5	4346004	uncharacterized LOC4346004
osa-u.5	9271668	uncharacterized LOC9271668
zma-u.5	100501942	uncharacterized LOC100501942
zma-u.5	100277694	uncharacterized LOC100277694
zma-u.5	103639942	uncharacterized LOC103639942
tae-r.2	123104179	uncharacterized LOC123104179
tae-r.2	123112419	uncharacterized LOC123112419
tae-r.2	123151254	uncharacterized LOC123151254
hvu-r.1	123399429	uncharacterized LOC123399429
hvu-r.1	123408821	uncharacterized LOC123408821
sbi-r.1	8055173	uncharacterized LOC8055173
sbi-r.1	8064856	uncharacterized LOC8064856
bdi-r.1	100825556	uncharacterized LOC100825556
bdi-r.1	100823595	uncharacterized LOC100823595

Top 50 coexpressed genes to 107899747 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107899747 (ghi-r.1 coexpression data)

CoexMap"107899747"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_016681020.2 [sequence] [blastp]
XP_016681021.2 [sequence] [blastp]
XP_016681022.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, chlo 1, cyto 1, extr 1, golg 1, chlo_mito 1	(predict for XP_016681020.2)
nucl 6, chlo 1, cyto 1, extr 1, golg 1, chlo_mito 1	(predict for XP_016681021.2)
nucl 6, chlo 1, cyto 1, extr 1, golg 1, chlo_mito 1	(predict for XP_016681022.2)

Subcellular
localization
TargetP

mito 4	(predict for XP_016681020.2)
mito 4	(predict for XP_016681021.2)
mito 4	(predict for XP_016681022.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107899747	ghi-r.1 for 107891594	ghi-r.1 for 107948274	ghi-r.1 for 107889078	ath-u.5 for AT3G57990	bra-r.6 for 103841696	bra-r.6 for 103863013	bna-r.1 for BNAC04G23860D	bna-r.1 for BNAC08G28920D	bna-r.1 for 106368179	cit-r.1 for 102630624	gma-u.5 for 100797011	gma-u.5 for 100796667	vvi-u.5 for 100260592	vvi-u.5 for 100240833	ppo-u.5 for 7479533	ppo-u.5 for 112324476	mtr-u.5 for 25483511	sly-u.5 for 101262064	sot-r.1 for 102595892	sot-r.1 for 107062962	nta-r.1 for 107760415	nta-r.1 for 107818287	osa-u.5 for 4346004	osa-u.5 for 9271668	zma-u.5 for 100501942	zma-u.5 for 100277694	zma-u.5 for 103639942	tae-r.2 for 123104179	tae-r.2 for 123112419	tae-r.2 for 123151254	hvu-r.1 for 123399429	hvu-r.1 for 123408821	sbi-r.1 for 8055173	sbi-r.1 for 8064856	bdi-r.1 for 100825556	bdi-r.1 for 100823595

Ortholog

Ortholog ID: 4578

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC107899747

uncharacterized LOC107891594

uncharacterized LOC107889078

uncharacterized protein

uncharacterized LOC103841696

uncharacterized LOC103863013

uncharacterized BNAC04G23860D

uncharacterized LOC106368179

uncharacterized BNAA04G27590D

uncharacterized LOC102630624

uncharacterized LOC100797011

uncharacterized LOC100796667

uncharacterized LOC100260592

hypothetical protein

uncharacterized LOC7479533

uncharacterized LOC112324476

uncharacterized LOC25483511

uncharacterized LOC101262064

uncharacterized LOC102595892

uncharacterized LOC107062962

uncharacterized LOC107760415

uncharacterized LOC107818287

uncharacterized LOC4346004

uncharacterized LOC9271668

uncharacterized LOC100501942

uncharacterized LOC103639942

uncharacterized LOC100194067

uncharacterized LOC123104179

uncharacterized LOC123151254

uncharacterized LOC123121937

uncharacterized LOC123399429

uncharacterized LOC123408821

uncharacterized LOC8055173

uncharacterized LOC8064856

uncharacterized LOC100825556

uncharacterized LOC100823595

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03060	Protein export	2
ghi04146	Peroxisome	2
ghi00620	Pyruvate metabolism	2
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00230	Purine metabolism	2
ath00030	Pentose phosphate pathway	2
ath01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00592	alpha-Linolenic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03015	mRNA surveillance pathway	3
mtr03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	5
sot04145	Phagosome	4
sot04016	MAPK signaling pathway - plant	4
sot04070	Phosphatidylinositol signaling system	4
sot04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03020	RNA polymerase	2
nta03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03020	RNA polymerase	2
nta03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03015	mRNA surveillance pathway	2
zma04382	Cornified envelope formation	2
zma03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03250	Viral life cycle - HIV-1	3
tae03272	Virion - Hepatitis viruses	3
tae04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00900	Terpenoid backbone biosynthesis	3
tae00511	Other glycan degradation	2
tae00513	Various types of N-glycan biosynthesis	2
tae00520	Amino sugar and nucleotide sugar metabolism	2
tae00531	Glycosaminoglycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03250	Viral life cycle - HIV-1	3
tae03272	Virion - Hepatitis viruses	3
tae04144	Endocytosis	3

Expression

Expression pattern

Entrez Gene ID^*

107899747

107891594

107889078

824968

103841696

103863013

106396869

106368179

106382812

102630624

100797011

100796667

100260592

100240833

7479533

112324476

25483511

101262064

102595892

107062962

107760415

107818287

4346004

9271668

100501942

103639942

100194067

123104179

123151254

123121937

123399429

123408821

8055173

8064856

100825556

100823595

The preparation time of this page was 0.1 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	1	2	3	1	2	2	2	1	1	2	2	2	3	3	2	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107899747 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107899747 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**