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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107901127   transcription factor MYBS3 
 ghi-r.1   107962763   transcription factor MYBS3 
 ghi-r.1   107937711   transcription factor MYBS3 
 ghi-r.1   107907149   transcription factor MYBS3 
 ath-u.5   AT5G56840   myb-like transcription factor family protein 
 bra-r.6   103845112   transcription factor MYBS3 
 bra-r.6   103856794   transcription factor MYBS3 
 bna-r.1   106436397   transcription factor MYBS3 
 bna-r.1   106370323   transcription factor MYBS3-like 
 bna-r.1   111204356   transcription factor MYBS3-like 
 cit-r.1   102624682   transcription factor MYBS3 
 gma-u.5   MYB127   MYB transcription factor MYB127 
 gma-u.5   778093   transcription factor MYBS3 
 vvi-u.5   100242268   transcription factor MYBS3 
 vvi-u.5   100247499   transcription factor MYBS3 
 ppo-u.5   7497617   transcription factor MYBS3 
 mtr-u.5   11442166   transcription factor MYBS3 
 mtr-u.5   11438458   transcription factor MYBS3 
 sly-u.5   101265743   transcription factor MYBS3-like 
 sly-u.5   101267581   transcription factor MYBS3 
 sot-r.1   102587181   transcription factor MYB1R1-like 
 sot-r.1   102594971   myb-like protein J 
 nta-r.1   107817283   transcription factor MYBS3-like 
 nta-r.1   107811409   transcription factor MYBS3 
 nta-r.1   107832572   putative transcription factor At5g61620 
 osa-u.5   4339780   transcription factor MYBS3-like 
 osa-u.5   4338039   transcription factor MYBS3-like 
 osa-u.5   4327305   transcription factor MYBS3-like 
 zma-u.5   110973014   uncharacterized LOC110973014 
 zma-u.5   100381732   MYB-related transcription factor 
 zma-u.5   100194332   uncharacterized LOC100194332 
 tae-r.2   123078520   transcription factor MYBS3 
 tae-r.2   123068900   transcription factor MYBS1 
 tae-r.2   123060370   transcription factor MYBS1 
 hvu-r.1   123439942   transcription factor MYBS3-like 
 hvu-r.1   123442898   transcription factor MYBS3-like 
 sbi-r.1   110430297   transcription factor MYBS3-like 
 sbi-r.1   8065907   transcription factor MYBS3 
 sbi-r.1   8082503   transcription factor MYBS3 
 bdi-r.1   100840296   transcription factor MYBS3 
 bdi-r.1   100839820   transcription factor MYBS3 

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Top 50 coexpressed genes to 107901127 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107901127 (ghi-r.1 coexpression data)

CoexMap"107901127"


ghiLOC107901127 | Entrez gene ID : 107901127    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 2 3 1 2 2 1 2 2 2 3 3 3 3 2 3 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009739 [list] [network] response to gibberellin  (63 genes)  IEA  
GO:0009723 [list] [network] response to ethylene  (233 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (1753 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (4831 genes)  IEA  
Protein XP_016682496.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 4,  chlo_mito 4  (predict for XP_016682496.1)
Subcellular
localization
TargetP
chlo 7,  mito 3  (predict for XP_016682496.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107901127
ghi-r.1
for
107962763
ghi-r.1
for
107937711
ghi-r.1
for
107907149
ath-u.5
for
AT5G56840
bra-r.6
for
103845112
bra-r.6
for
103856794
bna-r.1
for
106436397
bna-r.1
for
106370323
bna-r.1
for
111204356
cit-r.1
for
102624682
gma-u.5
for
MYB127
gma-u.5
for
778093
vvi-u.5
for
100242268
vvi-u.5
for
100247499
ppo-u.5
for
7497617
mtr-u.5
for
11442166
mtr-u.5
for
11438458
sly-u.5
for
101265743
sly-u.5
for
101267581
sot-r.1
for
102587181
sot-r.1
for
102594971
nta-r.1
for
107817283
nta-r.1
for
107811409
nta-r.1
for
107832572
osa-u.5
for
4339780
osa-u.5
for
4338039
osa-u.5
for
4327305
zma-u.5
for
110973014
zma-u.5
for
100381732
zma-u.5
for
100194332
tae-r.2
for
123078520
tae-r.2
for
123068900
tae-r.2
for
123060370
hvu-r.1
for
123439942
hvu-r.1
for
123442898
sbi-r.1
for
110430297
sbi-r.1
for
8065907
sbi-r.1
for
8082503
bdi-r.1
for
100840296
bdi-r.1
for
100839820


Ortholog ID: 2944
Species ghi ghi ghi ath bra bra bna bna bna cit gma gma vvi vvi ppo mtr mtr sly sly sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi
Symbol LOC107962763 LOC107937711 LOC107907149 AT5G56840 LOC103845112 LOC103856794 LOC106436397 LOC106370323 LOC111204356 LOC102624682 MYB127 LOC778093 LOC100242268 LOC100247499 LOC7497617 LOC11442166 LOC11438458 LOC101265743 LOC101267581 LOC102587181 LOC102594971 LOC107817283 LOC107811409 LOC107775558 LOC4339780 LOC4338039 LOC4327305 LOC110973014 LOC100381732 LOC100194332 LOC123078520 LOC123070065 LOC123077428 LOC123439942 LOC123442898 LOC110430297 LOC8065907 LOC8082503 LOC100840296 LOC100839820
Function* transcription factor MYBS3 transcription factor MYBS3 transcription factor MYBS3 myb-like transcription factor family protein transcription factor MYBS3 transcription factor MYBS3 transcription factor MYBS3 transcription factor MYBS3-like transcription factor MYBS3-like transcription factor MYBS3 MYB transcription factor MYB127 transcription factor MYBS3 transcription factor MYBS3 transcription factor MYBS3 transcription factor MYBS3 transcription factor MYBS3 transcription factor MYBS3 transcription factor MYBS3-like transcription factor MYBS3 transcription factor MYB1R1-like myb-like protein J transcription factor MYBS3-like transcription factor MYBS3 transcription factor MYBS3-like transcription factor MYBS3-like transcription factor MYBS3-like transcription factor MYBS3-like uncharacterized LOC110973014 MYB-related transcription factor uncharacterized LOC100194332 transcription factor MYBS3 transcription factor MYBS3 transcription factor MYBS1 transcription factor MYBS3-like transcription factor MYBS3-like transcription factor MYBS3-like transcription factor MYBS3 transcription factor MYBS3 transcription factor MYBS3 transcription factor MYBS3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 4
ath00710 Carbon fixation by Calvin cycle 3
ath00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
bra00910 Nitrogen metabolism 3
bra00220 Arginine biosynthesis 2
bra00250 Alanine, aspartate and glutamate metabolism 2
bra00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00220 Arginine biosynthesis 2
bna00250 Alanine, aspartate and glutamate metabolism 2
bna00630 Glyoxylate and dicarboxylate metabolism 2
bna00910 Nitrogen metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 4
cit00710 Carbon fixation by Calvin cycle 3
cit00010 Glycolysis / Gluconeogenesis 2
cit00030 Pentose phosphate pathway 2
cit00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 5
vvi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00906 Carotenoid biosynthesis 4
mtr00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00941 Flavonoid biosynthesis 4
sot04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 7
zma04016 MAPK signaling pathway - plant 6
zma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 4
zma04120 Ubiquitin mediated proteolysis 3
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 9
tae00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 4
tae00940 Phenylpropanoid biosynthesis 3
tae00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 5
sbi04016 MAPK signaling pathway - plant 2
sbi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 4
bdi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107962763 107937711 107907149 835786 103845112 103856794 106436397 106370323 111204356 102624682 778052 778093 100242268 100247499 7497617 11442166 11438458 101265743 101267581 102587181 102594971 107817283 107811409 107775558 4339780 4338039 4327305 110973014 100381732 100194332 123078520 123070065 123077428 123439942 123442898 110430297 8065907 8082503 100840296 100839820
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