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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107901321   TBC1 domain family member 17 
 ghi-r.1   107942692   TBC1 domain family member 17 
 ghi-r.1   121219994   TBC1 domain family member 15 
 ghi-r.1   107909213   TBC1 domain family member 15 
 ath-u.5   AT5G52580   RabGAP/TBC domain-containing protein 
 bra-r.6   103852085   TBC1 domain family member 15 
 bna-r.1   106391516   TBC1 domain family member 15 
 bna-r.1   106415462   TBC1 domain family member 15-like 
 cit-r.1   102618520   uncharacterized LOC102618520 
 gma-u.5   100809001   TBC1 domain family member 15 
 gma-u.5   100803563   TBC1 domain family member 15 
 vvi-u.5   100260961   uncharacterized LOC100260961 
 ppo-u.5   18099927   uncharacterized LOC18099927 
 ppo-u.5   7459878   uncharacterized LOC7459878 
 mtr-u.5   11438160   TBC1 domain family member 15 
 sly-u.5   101268585   uncharacterized LOC101268585 
 sly-u.5   101259814   uncharacterized LOC101259814 
 sot-r.1   102596630   TBC1 domain family member 17-like 
 sot-r.1   102584324   TBC1 domain family member 17-like 
 nta-r.1   107810729   uncharacterized LOC107810729 
 nta-r.1   107791728   uncharacterized LOC107791728 
 osa-u.5   4330486   uncharacterized LOC4330486 
 zma-u.5   100382640   uncharacterized LOC100382640 
 tae-r.2   123137956   TBC1 domain family member 15 
 tae-r.2   123128154   GTPase-activating protein gyp7 
 tae-r.2   123145254   GTPase-activating protein gyp7 
 hvu-r.1   123406095   TBC1 domain family member 15 
 sbi-r.1   8073844   TBC1 domain family member 15 
 bdi-r.1   100828896   TBC1 domain family member 15 
 cre-r.1   CHLRE_12g537750v5   uncharacterized protein 

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Top 50 coexpressed genes to 107901321 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107901321 (ghi-r.1 coexpression data)

CoexMap"107901321"


ghiLOC107901321 | Entrez gene ID : 107901321    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 2 1 2 1 2 1 2 2 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0090630 [list] [network] activation of GTPase activity  (45 genes)  IEA  
GO CC
GO MF
GO:0005096 [list] [network] GTPase activator activity  (177 genes)  IEA  
Protein XP_016682758.2 [sequence] [blastp]
XP_040951162.1 [sequence] [blastp]
XP_040951163.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  chlo 1,  cyto 1,  vacu 1,  chlo_mito 1  (predict for XP_016682758.2)
nucl 8,  chlo 1,  cyto 1,  vacu 1  (predict for XP_040951162.1)
nucl 7,  chlo 1,  cyto 1,  vacu 1,  chlo_mito 1  (predict for XP_040951163.1)
Subcellular
localization
TargetP
other 9  (predict for XP_016682758.2)
other 9  (predict for XP_040951162.1)
other 9  (predict for XP_040951163.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107901321
ghi-r.1
for
107942692
ghi-r.1
for
121219994
ghi-r.1
for
107909213
ath-u.5
for
AT5G52580
bra-r.6
for
103852085
bna-r.1
for
106391516
bna-r.1
for
106415462
cit-r.1
for
102618520
gma-u.5
for
100809001
gma-u.5
for
100803563
vvi-u.5
for
100260961
ppo-u.5
for
18099927
ppo-u.5
for
7459878
mtr-u.5
for
11438160
sly-u.5
for
101268585
sly-u.5
for
101259814
sot-r.1
for
102596630
sot-r.1
for
102584324
nta-r.1
for
107810729
nta-r.1
for
107791728
osa-u.5
for
4330486
zma-u.5
for
100382640
tae-r.2
for
123137956
tae-r.2
for
123128154
tae-r.2
for
123145254
hvu-r.1
for
123406095
sbi-r.1
for
8073844
bdi-r.1
for
100828896
cre-r.1
for
CHLRE_12g537750v5


Ortholog ID: 6681
Species ghi ghi ghi ath bra bna bna cit gma gma vvi ppo ppo mtr sly sly sot sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC107901321 LOC107942692 LOC107909213 AT5G52580 LOC103852085 LOC106391516 LOC106415462 LOC102618520 LOC100809001 LOC100803563 LOC100260961 LOC18099927 LOC7459878 LOC11438160 LOC101268585 LOC101259814 LOC102596630 LOC102584324 LOC107810729 LOC107791728 LOC4330486 LOC100382640 LOC123137956 LOC123128154 LOC123145254 LOC123406095 LOC8073844 LOC100828896 CHLRE_12g537750v5
Function* TBC1 domain family member 17 TBC1 domain family member 17 TBC1 domain family member 15 RabGAP/TBC domain-containing protein TBC1 domain family member 15 TBC1 domain family member 15 TBC1 domain family member 15-like uncharacterized LOC102618520 TBC1 domain family member 15 TBC1 domain family member 15 uncharacterized LOC100260961 uncharacterized LOC18099927 uncharacterized LOC7459878 TBC1 domain family member 15 uncharacterized LOC101268585 uncharacterized LOC101259814 TBC1 domain family member 17-like TBC1 domain family member 17-like uncharacterized LOC107810729 uncharacterized LOC107791728 uncharacterized LOC4330486 uncharacterized LOC100382640 TBC1 domain family member 15 GTPase-activating protein gyp7 GTPase-activating protein gyp7 TBC1 domain family member 15 TBC1 domain family member 15 TBC1 domain family member 15 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 4
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 5
bra04120 Ubiquitin mediated proteolysis 3
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 5
bna00564 Glycerophospholipid metabolism 2
bna00565 Ether lipid metabolism 2
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
bna00562 Inositol phosphate metabolism 4
bna04070 Phosphatidylinositol signaling system 4
bna00564 Glycerophospholipid metabolism 2
bna00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00561 Glycerolipid metabolism 2
gma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00561 Glycerolipid metabolism 2
gma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03083 Polycomb repressive complex 2
sot04120 Ubiquitin mediated proteolysis 2
sot04141 Protein processing in endoplasmic reticulum 2
sot04130 SNARE interactions in vesicular transport 2
sot04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta00232 Caffeine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 3
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 2
osa00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 4
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 4
hvu00071 Fatty acid degradation 2
hvu00592 alpha-Linolenic acid metabolism 2
hvu01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00280 Valine, leucine and isoleucine degradation 3
sbi01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00071 Fatty acid degradation 5
bdi01212 Fatty acid metabolism 5
bdi00592 alpha-Linolenic acid metabolism 3
bdi04146 Peroxisome 3
bdi01200 Carbon metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107901321 107942692 107909213 835335 103852085 106391516 106415462 102618520 100809001 100803563 100260961 18099927 7459878 11438160 101268585 101259814 102596630 102584324 107810729 107791728 4330486 100382640 123137956 123128154 123145254 123406095 8073844 100828896 5718459
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