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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107901394   metal transporter Nramp5 
 ghi-r.1   121217847   metal transporter Nramp5 
 ghi-r.1   107956397   metal transporter Nramp5 
 ghi-r.1   107940551   metal transporter Nramp5 
 ath-u.5   NRAMP6   NRAMP metal ion transporter 6 
 ath-u.5   NRAMP1   natural resistance-associated macrophage protein 1 
 bra-r.6   103830460   metal transporter Nramp1 
 bra-r.6   103853215   metal transporter Nramp1 
 bra-r.6   103832453   metal transporter Nramp1 
 bna-r.1   125599967   metal transporter Nramp1 
 bna-r.1   111211330   metal transporter Nramp1-like 
 bna-r.1   106381556   metal transporter Nramp1 
 cit-r.1   102625328   metal transporter Nramp5-like 
 cit-r.1   102615690   metal transporter Nramp6 
 gma-u.5   NRAMP5A   metal transporter Nramp5a 
 gma-u.5   NRAMP5B   metal transporter Nramp5b 
 gma-u.5   NRAMP6A   metal transporter Nramp6a 
 vvi-u.5   100266052   metal transporter Nramp6.2 
 vvi-u.5   100262929   metal transporter Nramp7.2 
 vvi-u.5   100256746   metal transporter Nramp1 
 ppo-u.5   18094263   metal transporter Nramp6 
 mtr-u.5   11427810   metal transporter Nramp5 
 mtr-u.5   11418113   metal transporter Nramp5 
 mtr-u.5   25487976   metal transporter Nramp6 
 sly-u.5   NRAMP1   root-specific metal transporter 
 sly-u.5   101246519   metal transporter Nramp1 
 sot-r.1   102594505   metal transporter Nramp6 
 sot-r.1   102584518   metal transporter Nramp5-like 
 nta-r.1   107805782   metal transporter Nramp6.1-like 
 nta-r.1   107801964   metal transporter Nramp1 
 nta-r.1   107797051   metal transporter Nramp6-like 
 osa-u.5   4342862   metal transporter Nramp1-like 
 osa-u.5   9267339   metal transporter Nramp3-like 
 osa-u.5   4342859   metal transporter Nramp5-like 
 zma-u.5   100193537   nramp aluminum transporter1 
 zma-u.5   100280443   uncharacterized LOC100280443 
 tae-r.2   123157470   metal transporter Nramp3 
 tae-r.2   123084686   metal transporter Nramp5 
 tae-r.2   123093420   metal transporter Nramp5 
 hvu-r.1   123412449   metal transporter Nramp3 
 hvu-r.1   123449639   metal transporter Nramp5-like 
 sbi-r.1   8054434   metal transporter Nramp5 
 sbi-r.1   8083203   metal transporter Nramp3 
 bdi-r.1   100839981   metal transporter Nramp3 
 cre-r.1   CHLRE_07g321951v5   uncharacterized protein 
 cre-r.1   CHLRE_17g707700v5   uncharacterized protein 

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Top 50 coexpressed genes to 107901394 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107901394 (ghi-r.1 coexpression data)

CoexMap"107901394"


ghiLOC107901394 | Entrez gene ID : 107901394    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 2 3 3 1 3 2 2 3 3 2 3 2 2 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi04142 [list] [network] Lysosome (184 genes)
GO BP
GO:0030001 [list] [network] metal ion transport  (442 genes)  IEA  
GO CC
GO:0016020 [list] [network] membrane  (8195 genes)  IEA  
GO MF
GO:0015086 [list] [network] cadmium ion transmembrane transporter activity  (24 genes)  IEA  
GO:0005384 [list] [network] manganese ion transmembrane transporter activity  (57 genes)  IEA  
Protein XP_016682876.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 8,  chlo 1,  cyto 1,  vacu 1  (predict for XP_016682876.1)
Subcellular
localization
TargetP
other 5,  mito 3  (predict for XP_016682876.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107901394
ghi-r.1
for
121217847
ghi-r.1
for
107956397
ghi-r.1
for
107940551
ath-u.5
for
NRAMP6
ath-u.5
for
NRAMP1
bra-r.6
for
103830460
bra-r.6
for
103853215
bra-r.6
for
103832453
bna-r.1
for
125599967
bna-r.1
for
111211330
bna-r.1
for
106381556
cit-r.1
for
102625328
cit-r.1
for
102615690
gma-u.5
for
NRAMP5A
gma-u.5
for
NRAMP5B
gma-u.5
for
NRAMP6A
vvi-u.5
for
100266052
vvi-u.5
for
100262929
vvi-u.5
for
100256746
ppo-u.5
for
18094263
mtr-u.5
for
11427810
mtr-u.5
for
11418113
mtr-u.5
for
25487976
sly-u.5
for
NRAMP1
sly-u.5
for
101246519
sot-r.1
for
102594505
sot-r.1
for
102584518
nta-r.1
for
107805782
nta-r.1
for
107801964
nta-r.1
for
107797051
osa-u.5
for
4342862
osa-u.5
for
9267339
osa-u.5
for
4342859
zma-u.5
for
100193537
zma-u.5
for
100280443
tae-r.2
for
123157470
tae-r.2
for
123084686
tae-r.2
for
123093420
hvu-r.1
for
123412449
hvu-r.1
for
123449639
sbi-r.1
for
8054434
sbi-r.1
for
8083203
bdi-r.1
for
100839981
cre-r.1
for
CHLRE_07g321951v5
cre-r.1
for
CHLRE_17g707700v5


Ortholog ID: 1770
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit cit gma gma gma vvi vvi mtr mtr mtr sly sly sot sot nta nta nta osa osa osa zma zma tae tae hvu hvu sbi sbi bdi cre cre
Symbol LOC121217847 LOC107956397 LOC107906425 NRAMP6 NRAMP1 LOC103830460 LOC103853215 LOC103832453 LOC111211330 LOC106429708 LOC106430742 LOC102625328 LOC102615690 NRAMP5A NRAMP5B NRAMP6B LOC100266052 LOC100262929 LOC11427810 LOC11418113 LOC25487976 NRAMP1 LOC101246519 LOC102594505 LOC102584518 LOC107805782 LOC107797051 LOC107760691 LOC4342862 LOC9267339 LOC4342859 LOC100193537 LOC100280443 LOC123149091 LOC123166850 LOC123412449 LOC123449639 LOC8054434 LOC8083203 LOC100839981 CHLRE_07g321951v5 CHLRE_17g707700v5
Function* metal transporter Nramp5 metal transporter Nramp5 metal transporter Nramp6 NRAMP metal ion transporter 6 natural resistance-associated macrophage protein 1 metal transporter Nramp1 metal transporter Nramp1 metal transporter Nramp1 metal transporter Nramp1-like metal transporter Nramp1 metal transporter Nramp1-like metal transporter Nramp5-like metal transporter Nramp6 metal transporter Nramp5a metal transporter Nramp5b metal transporter Nramp6b metal transporter Nramp6.2 metal transporter Nramp7.2 metal transporter Nramp5 metal transporter Nramp5 metal transporter Nramp6 root-specific metal transporter metal transporter Nramp1 metal transporter Nramp6 metal transporter Nramp5-like metal transporter Nramp6.1-like metal transporter Nramp6-like metal transporter Nramp7.2-like metal transporter Nramp1-like metal transporter Nramp3-like metal transporter Nramp5-like nramp aluminum transporter1 uncharacterized LOC100280443 metal transporter Nramp3 metal transporter Nramp3 metal transporter Nramp3 metal transporter Nramp5-like metal transporter Nramp5 metal transporter Nramp3 metal transporter Nramp3 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 2
bra00073 Cutin, suberine and wax biosynthesis 2
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
gma00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 5
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00100 Steroid biosynthesis 2
mtr00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 7
mtr04145 Phagosome 6
mtr04142 Lysosome 3
mtr01240 Biosynthesis of cofactors 2
mtr00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 3
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 2
nta00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
nta01240 Biosynthesis of cofactors 2
nta00760 Nicotinate and nicotinamide metabolism 2
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 2
nta00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00270 Cysteine and methionine metabolism 4
zma00999 Biosynthesis of various plant secondary metabolites 3
zma01200 Carbon metabolism 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 4
tae04142 Lysosome 3
tae00220 Arginine biosynthesis 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00910 Nitrogen metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 4
tae04142 Lysosome 3
tae00220 Arginine biosynthesis 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00910 Nitrogen metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu04145 Phagosome 3
hvu04144 Endocytosis 2
hvu04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 2
sbi04382 Cornified envelope formation 2
sbi04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121217847 107956397 107906425 838166 844422 103830460 103853215 103832453 111211330 106429708 106430742 102625328 102615690 100815628 100800523 100808501 100266052 100262929 11427810 11418113 25487976 543868 101246519 102594505 102584518 107805782 107797051 107760691 4342862 9267339 4342859 100193537 100280443 123149091 123166850 123412449 123449639 8054434 8083203 100839981 5726598 5717186
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