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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107901487   zinc transporter 4, chloroplastic 
 ghi-r.1   107912660   zinc transporter 5 
 ghi-r.1   107916446   fe(2+) transport protein 1 
 ghi-r.1   107916930   zinc transporter 1 
 ath-u.5   IRT1   iron-regulated transporter 1 
 ath-u.5   ZIP5   zinc transporter 5 precursor 
 bra-r.6   103850142   zinc transporter 9 
 bra-r.6   103857713   fe(2+) transport protein 1 
 bra-r.6   103870229   zinc transporter 1 
 bna-r.1   106451450   zinc transporter 6, chloroplastic 
 bna-r.1   106411649   probable zinc transporter 10 
 bna-r.1   106412072   zinc transporter 4, chloroplastic 
 cit-r.1   102615205   zinc transporter 1 
 cit-r.1   102608591   zinc transporter 1 
 gma-u.5   100797310   zinc transporter 6, chloroplastic 
 gma-u.5   100795511   probable zinc transporter 10-like 
 gma-u.5   IRT   probable zinc transporter 10-like 
 vvi-u.5   100250102   zinc transporter 6, chloroplastic 
 vvi-u.5   109121469   zinc transporter 5 
 vvi-u.5   100250216   zinc transporter 1 
 ppo-u.5   7460672   zinc transporter 1 
 ppo-u.5   7475007   zinc transporter 6, chloroplastic 
 mtr-u.5   11409182   zinc transporter 4, chloroplastic 
 mtr-u.5   11416590   zinc transporter 6, chloroplastic 
 sly-u.5   101260003   zinc transporter 3 
 sly-u.5   101259773   zinc transporter 4, chloroplastic 
 sly-u.5   101257981   zinc transporter 5-like 
 sot-r.1   102578180   zinc transporter 8-like 
 sot-r.1   102581599   fe(2+) transport protein 1-like 
 sot-r.1   102579660   zinc transporter 6, chloroplastic 
 nta-r.1   107782418   zinc transporter 1-like 
 nta-r.1   107785537   zinc transporter 1 
 osa-u.5   4336971   zinc transporter 3-like 
 osa-u.5   4338051   zinc transporter 7-like 
 osa-u.5   4333669   fe(2+) transport protein 1-like 
 zma-u.5   103630465   zinc transporter 5 
 zma-u.5   103652993   zinc transporter 4-like 
 tae-r.2   123115725   zinc transporter 7 
 tae-r.2   123054879   zinc transporter 8 
 tae-r.2   123054312   zinc transporter 3 
 hvu-r.1   123429587   zinc transporter 8-like 
 sbi-r.1   8063959   zinc transporter 3 
 sbi-r.1   8080928   zinc transporter 6 
 bdi-r.1   100822361   zinc transporter 8 
 cre-r.1   CHLRE_13g573950v5   uncharacterized protein 
 cre-r.1   CHLRE_07g355150v5   uncharacterized protein 
 cre-r.1   CHLRE_06g299600v5   uncharacterized protein 

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Top 50 coexpressed genes to 107901487 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107901487 (ghi-r.1 coexpression data)

CoexMap"107901487"


ghiLOC107901487 | Entrez gene ID : 107901487    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 2 3 3 2 2 3 3 2 3 2 3 1 2 1 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0071577 [list] [network] zinc ion transmembrane transport  (56 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (2553 genes)  IEA  
GO MF
GO:0005385 [list] [network] zinc ion transmembrane transporter activity  (59 genes)  IEA  
Protein XP_016683012.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 5,  chlo 1,  vacu 1,  nucl 1,  cyto 1,  E.R. 1,  cyto_nucl 1,  chlo_mito 1,  cyto_E.R. 1  (predict for XP_016683012.1)
Subcellular
localization
TargetP
other 8,  scret 7  (predict for XP_016683012.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107901487
ghi-r.1
for
107912660
ghi-r.1
for
107916446
ghi-r.1
for
107916930
ath-u.5
for
IRT1
ath-u.5
for
ZIP5
bra-r.6
for
103850142
bra-r.6
for
103857713
bra-r.6
for
103870229
bna-r.1
for
106451450
bna-r.1
for
106411649
bna-r.1
for
106412072
cit-r.1
for
102615205
cit-r.1
for
102608591
gma-u.5
for
100797310
gma-u.5
for
100795511
gma-u.5
for
IRT
vvi-u.5
for
100250102
vvi-u.5
for
109121469
vvi-u.5
for
100250216
ppo-u.5
for
7460672
ppo-u.5
for
7475007
mtr-u.5
for
11409182
mtr-u.5
for
11416590
sly-u.5
for
101260003
sly-u.5
for
101259773
sly-u.5
for
101257981
sot-r.1
for
102578180
sot-r.1
for
102581599
sot-r.1
for
102579660
nta-r.1
for
107782418
nta-r.1
for
107785537
osa-u.5
for
4336971
osa-u.5
for
4338051
osa-u.5
for
4333669
zma-u.5
for
103630465
zma-u.5
for
103652993
tae-r.2
for
123115725
tae-r.2
for
123054879
tae-r.2
for
123054312
hvu-r.1
for
123429587
sbi-r.1
for
8063959
sbi-r.1
for
8080928
bdi-r.1
for
100822361
cre-r.1
for
CHLRE_13g573950v5
cre-r.1
for
CHLRE_07g355150v5
cre-r.1
for
CHLRE_06g299600v5


Ortholog ID: 88
Species ghi ghi ath ath ath bra bra bna cit cit cit gma gma vvi vvi ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi bdi bdi bdi cre cre cre
Symbol LOC107937297 LOC107927072 IRT1 IRT2 ZIP4 LOC103840258 LOC103838466 LOC106451724 LOC102630191 LOC102625806 LOC102618469 LOC100805124 LOC100789557 LOC100255284 LOC100262239 LOC7475007 LOC18094647 LOC11409182 LOC11416590 LOC11444027 LOC101248893 LOC543597 LOC543598 LOC102578180 LOC102597154 LOC102581031 LOC107774468 LOC107823886 LOC107798016 LOC4336971 LOC9271816 LOC4333667 LOC100282628 LOC100285748 LOC100283249 LOC100136969 LOC100136968 LOC123158020 LOC123413003 LOC123427629 LOC123407407 LOC8080928 LOC8069132 LOC100822361 LOC100827984 LOC100830270 CHLRE_07g355150v5 CHLRE_06g299600v5 CHLRE_07g355100v5
Function* zinc transporter 5 zinc transporter 6, chloroplastic iron-regulated transporter 1 iron regulated transporter 2 zinc transporter probable zinc transporter 10 fe(2+) transport protein 3, chloroplastic fe(2+) transport protein 3, chloroplastic-like zinc transporter 6, chloroplastic zinc transporter 4, chloroplastic probable zinc transporter 10 zinc transporter 1 zinc transporter 8 zinc transporter 8 zinc transporter 8 zinc transporter 6, chloroplastic zinc transporter 1 zinc transporter 4, chloroplastic zinc transporter 6, chloroplastic fe(2+) transport protein 1 zinc transporter 5-like iron-regulated transporter 1 iron-regulated transporter 2 zinc transporter 8-like zinc transporter 4, chloroplastic fe(2+) transport protein 1-like zinc transporter 5-like fe(2+) transport protein 1-like putative zinc transporter 10 zinc transporter 3-like zinc transporter 10 fe(2+) transport protein 2-like zinc transporter 1 zinc transporter 10 ZIP zinc/iron transport family protein zinc transporter 7 zinc transporter 8 zinc transporter 10 zinc transporter 10-like zinc transporter 3-like zinc transporter 10-like zinc transporter 6 zinc transporter 8 zinc transporter 8 zinc transporter 6 zinc transporter 10 uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 2
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04148 Efferocytosis 3
bra04145 Phagosome 2
bra04517 IgSF CAM signaling 2
bra04518 Integrin signaling 2
bra04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00380 Tryptophan metabolism 3
cit00940 Phenylpropanoid biosynthesis 3
cit00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00270 Cysteine and methionine metabolism 3
gma00999 Biosynthesis of various plant secondary metabolites 3
gma00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
ppo00250 Alanine, aspartate and glutamate metabolism 2
ppo00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 2
sly00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 3
sot04075 Plant hormone signal transduction 3
sot04626 Plant-pathogen interaction 3
sot01230 Biosynthesis of amino acids 2
sot00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 6
nta00052 Galactose metabolism 6
nta00190 Oxidative phosphorylation 2
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00230 Purine metabolism 2
osa00240 Pyrimidine metabolism 2
osa01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00270 Cysteine and methionine metabolism 2
osa00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00910 Nitrogen metabolism 2
zma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107937297 107927072 827713 827712 837640 103840258 103838466 106451724 102630191 102625806 102618469 100805124 100789557 100255284 100262239 7475007 18094647 11409182 11416590 11444027 101248893 543597 543598 102578180 102597154 102581031 107774468 107823886 107798016 4336971 9271816 4333667 100282628 100285748 100283249 100136969 100136968 123158020 123413003 123427629 123407407 8080928 8069132 100822361 100827984 100830270 5727607 5716995 5727596
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