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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107903886   probable acyl-activating enzyme 16, chloroplastic 
 ghi-r.1   107957228   probable acyl-activating enzyme 16, chloroplastic 
 ghi-r.1   107920696   long-chain-fatty-acid--[acyl-carrier-protein] ligase AEE15, chloroplastic 
 ghi-r.1   107915105   probable acyl-activating enzyme 16, chloroplastic 
 ath-u.5   AAE16   AMP-dependent synthetase and ligase family protein 
 ath-u.5   AAE15   acyl-activating enzyme 15 
 bra-r.6   103863566   long-chain-fatty-acid--[acyl-carrier-protein] ligase AEE15, chloroplastic 
 bra-r.6   103860006   probable acyl-activating enzyme 16, chloroplastic 
 bna-r.1   125594147   probable acyl-activating enzyme 16, chloroplastic 
 bna-r.1   106445786   long-chain-fatty-acid--[acyl-carrier-protein] ligase AEE15, chloroplastic 
 bna-r.1   106412084   probable acyl-activating enzyme 16, chloroplastic 
 cit-r.1   102613044   probable acyl-activating enzyme 16, chloroplastic 
 gma-u.5   ACSL2   long-chain acyl-CoA synthetase ACSL2 
 gma-u.5   100782583   probable acyl-activating enzyme 16, chloroplastic 
 vvi-u.5   100247941   probable acyl-activating enzyme 16, chloroplastic 
 ppo-u.5   18107107   probable acyl-activating enzyme 16, chloroplastic 
 ppo-u.5   7495829   probable acyl-activating enzyme 16, chloroplastic 
 mtr-u.5   11438515   probable acyl-activating enzyme 16, chloroplastic 
 mtr-u.5   11429070   probable acyl-activating enzyme 16, chloroplastic 
 mtr-u.5   11410333   probable acyl-activating enzyme 16, chloroplastic 
 sly-u.5   101249020   probable acyl-activating enzyme 16, chloroplastic 
 sot-r.1   102586347   probable acyl-activating enzyme 16, chloroplastic 
 nta-r.1   107827314   putative acyl-activating enzyme 16, chloroplastic 
 osa-u.5   4334764   probable acyl-activating enzyme 16, chloroplastic 
 zma-u.5   103644323   probable acyl-activating enzyme 16, chloroplastic 
 tae-r.2   123087638   probable acyl-activating enzyme 16, chloroplastic 
 tae-r.2   123114296   probable acyl-activating enzyme 16, chloroplastic 
 tae-r.2   123114297   probable acyl-activating enzyme 16, chloroplastic 
 hvu-r.1   123395073   probable acyl-activating enzyme 16, chloroplastic 
 hvu-r.1   123395074   probable acyl-activating enzyme 16, chloroplastic 
 sbi-r.1   8060884   probable acyl-activating enzyme 16, chloroplastic 
 bdi-r.1   100832904   probable acyl-activating enzyme 16, chloroplastic 
 cre-r.1   CHLRE_06g299800v5   uncharacterized protein 

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Top 50 coexpressed genes to 107903886 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107903886 (ghi-r.1 coexpression data)

CoexMap"107903886"


ghiLOC107903886 | Entrez gene ID : 107903886    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 2 3 1 2 1 2 3 1 1 1 1 1 3 2 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00061 [list] [network] Fatty acid biosynthesis (127 genes)
ghi00071 [list] [network] Fatty acid degradation (133 genes)
ghi01212 [list] [network] Fatty acid metabolism (193 genes)
ghi04146 [list] [network] Peroxisome (210 genes)
GO BP
GO:0030497 [list] [network] fatty acid elongation  (29 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1647 genes)  IEA  
GO MF
GO:0008922 [list] [network] long-chain fatty acid [acyl-carrier-protein] ligase activity  (9 genes)  IEA  
Protein XP_016685555.1 [sequence] [blastp]
XP_040948547.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_016685555.1)
chlo 10  (predict for XP_040948547.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_016685555.1)
chlo 9  (predict for XP_040948547.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107903886
ghi-r.1
for
107957228
ghi-r.1
for
107920696
ghi-r.1
for
107915105
ath-u.5
for
AAE16
ath-u.5
for
AAE15
bra-r.6
for
103863566
bra-r.6
for
103860006
bna-r.1
for
125594147
bna-r.1
for
106445786
bna-r.1
for
106412084
cit-r.1
for
102613044
gma-u.5
for
ACSL2
gma-u.5
for
100782583
vvi-u.5
for
100247941
ppo-u.5
for
18107107
ppo-u.5
for
7495829
mtr-u.5
for
11438515
mtr-u.5
for
11429070
mtr-u.5
for
11410333
sly-u.5
for
101249020
sot-r.1
for
102586347
nta-r.1
for
107827314
osa-u.5
for
4334764
zma-u.5
for
103644323
tae-r.2
for
123087638
tae-r.2
for
123114296
tae-r.2
for
123114297
hvu-r.1
for
123395073
hvu-r.1
for
123395074
sbi-r.1
for
8060884
bdi-r.1
for
100832904
cre-r.1
for
CHLRE_06g299800v5


Ortholog ID: 5316
Species ghi ghi ghi ath ath bra bra bna bna bna cit gma gma vvi ppo ppo mtr mtr mtr sly sot nta osa zma tae tae tae hvu hvu sbi bdi cre
Symbol LOC107903886 LOC107920696 LOC107915105 AAE16 AAE15 LOC103863566 LOC103860006 LOC125594147 LOC106412084 LOC106389662 LOC102613044 ACSL2 LOC100782583 LOC100247941 LOC18107107 LOC7495829 LOC11438515 LOC11429070 LOC11410333 LOC101249020 LOC102586347 LOC107827314 LOC4334764 LOC103644323 LOC123087638 LOC123114296 LOC123114297 LOC123395073 LOC123395074 LOC8060884 LOC100832904 CHLRE_06g299800v5
Function* probable acyl-activating enzyme 16, chloroplastic long-chain-fatty-acid--[acyl-carrier-protein] ligase AEE15, chloroplastic probable acyl-activating enzyme 16, chloroplastic AMP-dependent synthetase and ligase family protein acyl-activating enzyme 15 long-chain-fatty-acid--[acyl-carrier-protein] ligase AEE15, chloroplastic probable acyl-activating enzyme 16, chloroplastic probable acyl-activating enzyme 16, chloroplastic probable acyl-activating enzyme 16, chloroplastic probable acyl-activating enzyme 16, chloroplastic probable acyl-activating enzyme 16, chloroplastic long-chain acyl-CoA synthetase ACSL2 probable acyl-activating enzyme 16, chloroplastic probable acyl-activating enzyme 16, chloroplastic probable acyl-activating enzyme 16, chloroplastic probable acyl-activating enzyme 16, chloroplastic probable acyl-activating enzyme 16, chloroplastic probable acyl-activating enzyme 16, chloroplastic probable acyl-activating enzyme 16, chloroplastic probable acyl-activating enzyme 16, chloroplastic probable acyl-activating enzyme 16, chloroplastic putative acyl-activating enzyme 16, chloroplastic probable acyl-activating enzyme 16, chloroplastic probable acyl-activating enzyme 16, chloroplastic probable acyl-activating enzyme 16, chloroplastic probable acyl-activating enzyme 16, chloroplastic probable acyl-activating enzyme 16, chloroplastic probable acyl-activating enzyme 16, chloroplastic probable acyl-activating enzyme 16, chloroplastic probable acyl-activating enzyme 16, chloroplastic probable acyl-activating enzyme 16, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00061 Fatty acid biosynthesis 2
ghi00071 Fatty acid degradation 2
ghi01212 Fatty acid metabolism 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 5
ghi04626 Plant-pathogen interaction 5
ghi00620 Pyruvate metabolism 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 4
ath00630 Glyoxylate and dicarboxylate metabolism 2
ath00020 Citrate cycle (TCA cycle) 2
ath00480 Glutathione metabolism 2
ath04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 3
bra00190 Oxidative phosphorylation 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 7
bna00061 Fatty acid biosynthesis 3
bna00071 Fatty acid degradation 3
bna01212 Fatty acid metabolism 3
bna04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00061 Fatty acid biosynthesis 3
bna00071 Fatty acid degradation 3
bna01212 Fatty acid metabolism 3
bna04146 Peroxisome 3
bna00460 Cyanoamino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 7
bna00061 Fatty acid biosynthesis 3
bna00071 Fatty acid degradation 3
bna01212 Fatty acid metabolism 3
bna04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00564 Glycerophospholipid metabolism 3
gma00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 3
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00900 Terpenoid backbone biosynthesis 2
ppo04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00760 Nicotinate and nicotinamide metabolism 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00061 Fatty acid biosynthesis 2
mtr00071 Fatty acid degradation 2
mtr01212 Fatty acid metabolism 2
mtr04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00061 Fatty acid biosynthesis 2
mtr00071 Fatty acid degradation 2
mtr01212 Fatty acid metabolism 2
mtr04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00061 Fatty acid biosynthesis 7
zma01212 Fatty acid metabolism 7
zma00620 Pyruvate metabolism 4
zma00780 Biotin metabolism 3
zma01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 5
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
tae00061 Fatty acid biosynthesis 3
tae00071 Fatty acid degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 4
tae03010 Ribosome 4
tae00061 Fatty acid biosynthesis 3
tae00071 Fatty acid degradation 3
tae01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 9
tae00010 Glycolysis / Gluconeogenesis 6
tae00640 Propanoate metabolism 6
tae01200 Carbon metabolism 6
tae00061 Fatty acid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
hvu00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00564 Glycerophospholipid metabolism 2
sbi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 4
bdi00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 5
cre00630 Glyoxylate and dicarboxylate metabolism 2
cre00620 Pyruvate metabolism 2
cre00710 Carbon fixation by Calvin cycle 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107903886 107920696 107915105 821961 827043 103863566 103860006 125594147 106412084 106389662 102613044 100812745 100782583 100247941 18107107 7495829 11438515 11429070 11410333 101249020 102586347 107827314 4334764 103644323 123087638 123114296 123114297 123395073 123395074 8060884 100832904 5716991
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