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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   PUB23   plant U-box 23 
 ath-u.5   PUB24   E3 ubiquitin-protein ligase PUB24-like protein 
 ath-u.5   PUB22   plant U-box 22 
 gma-u.5   100809839   E3 ubiquitin-protein ligase PUB22 
 gma-u.5   100786877   E3 ubiquitin-protein ligase PUB23 
 gma-u.5   100809123   E3 ubiquitin-protein ligase PUB22 
 vvi-u.5   100266002   E3 ubiquitin-protein ligase PUB23 
 vvi-u.5   100254792   E3 ubiquitin-protein ligase PUB23 
 vvi-u.5   100250551   E3 ubiquitin-protein ligase PUB23 
 ppo-u.5   7488089   E3 ubiquitin-protein ligase PUB22 
 mtr-u.5   25499491   E3 ubiquitin-protein ligase PUB22 
 mtr-u.5   11419064   E3 ubiquitin-protein ligase PUB23 
 mtr-u.5   25483686   E3 ubiquitin-protein ligase PUB23 
 sly-u.5   101267151   E3 ubiquitin-protein ligase PUB22-like 
 sly-u.5   101266855   E3 ubiquitin-protein ligase PUB22-like 
 osa-u.5   4329585   E3 ubiquitin-protein ligase PUB23 
 zma-u.5   103627250   E3 ubiquitin-protein ligase PUB23 
 zma-u.5   100274458   ubiquitin-protein ligase 

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Top 50 coexpressed genes to PUB23 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PUB23 (ath-u.5 coexpression data)

CoexMap"107904447"


ghiLOC107904447 | Entrez gene ID : 107904447    
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 3 3 1 3 2 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (962 genes)  IEA  
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (513 genes)  IEA  
Protein XP_016686326.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  nucl 1,  plas 1,  vacu 1,  cysk_nucl 1  (predict for XP_016686326.2)
Subcellular
localization
TargetP
other 8  (predict for XP_016686326.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
PUB23
ath-u.5
for
PUB24
ath-u.5
for
PUB22
gma-u.5
for
100809839
gma-u.5
for
100786877
gma-u.5
for
100809123
vvi-u.5
for
100266002
vvi-u.5
for
100254792
vvi-u.5
for
100250551
ppo-u.5
for
7488089
mtr-u.5
for
25499491
mtr-u.5
for
11419064
mtr-u.5
for
25483686
sly-u.5
for
101267151
sly-u.5
for
101266855
osa-u.5
for
4329585
zma-u.5
for
103627250
zma-u.5
for
100274458


Ortholog ID: 456
Species ghi ath ath bra bra bna bna cit gma gma vvi ppo mtr sot sot nta osa zma zma tae tae hvu hvu sbi bdi
Symbol LOC107925519 PUB22 PUB24 LOC103860764 LOC103845959 LOC106452503 LOC106415132 LOC102631041 LOC100778012 LOC100811293 LOC100266002 LOC7488089 LOC25499491 LOC102604295 LOC102603282 LOC107764225 LOC4337468 LOC100274458 LOC103627250 LOC123134976 LOC123134991 LOC123403862 LOC123403891 LOC8064235 LOC100825125
Function* E3 ubiquitin-protein ligase PUB23 plant U-box 22 E3 ubiquitin-protein ligase PUB24-like protein E3 ubiquitin-protein ligase PUB22 E3 ubiquitin-protein ligase PUB24 E3 ubiquitin-protein ligase PUB24-like E3 ubiquitin-protein ligase PUB24-like E3 ubiquitin-protein ligase PUB23-like E3 ubiquitin-protein ligase PUB23-like E3 ubiquitin-protein ligase PUB24 E3 ubiquitin-protein ligase PUB23 E3 ubiquitin-protein ligase PUB22 E3 ubiquitin-protein ligase PUB22 E3 ubiquitin-protein ligase PUB24-like E3 ubiquitin-protein ligase PUB22-like E3 ubiquitin-protein ligase PUB23-like E3 ubiquitin-protein ligase PUB23 ubiquitin-protein ligase E3 ubiquitin-protein ligase PUB23 E3 ubiquitin-protein ligase PUB23 E3 ubiquitin-protein ligase PUB23-like E3 ubiquitin-protein ligase PUB23-like E3 ubiquitin-protein ligase PUB23-like E3 ubiquitin-protein ligase PUB23 E3 ubiquitin-protein ligase PUB23
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 2
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00430 Taurine and hypotaurine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna02010 ABC transporters 2
bna00460 Cyanoamino acid metabolism 2
bna00500 Starch and sucrose metabolism 2
bna00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 3
cit04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 4
gma00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 2
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00592 alpha-Linolenic acid metabolism 3
hvu00430 Taurine and hypotaurine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04016 MAPK signaling pathway - plant 3
bdi04626 Plant-pathogen interaction 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107925519 824410 820357 103860764 103845959 106452503 106415132 102631041 100778012 100811293 100266002 7488089 25499491 102604295 102603282 107764225 4337468 100274458 103627250 123134976 123134991 123403862 123403891 8064235 100825125
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