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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107904452   superoxide dismutase [Mn], mitochondrial 
 ghi-r.1   107897935   superoxide dismutase [Mn], mitochondrial 
 ghi-r.1   107904849   superoxide dismutase [Mn], mitochondrial 
 ghi-r.1   107916272   superoxide dismutase [Mn], mitochondrial 
 ath-u.5   MSD1   manganese superoxide dismutase 1 
 ath-u.5   AT3G56350   Iron/manganese superoxide dismutase family protein 
 bra-r.6   103841543   superoxide dismutase [Mn] 2, mitochondrial 
 bra-r.6   MSD1   superoxide dismutase [Mn] 1, mitochondrial 
 bra-r.6   103870420   superoxide dismutase [Mn] 1, mitochondrial 
 bna-r.1   106452722   superoxide dismutase [Mn] 1, mitochondrial-like 
 bna-r.1   106452637   superoxide dismutase [Mn] 1, mitochondrial-like 
 bna-r.1   106434588   superoxide dismutase [Mn] 1, mitochondrial 
 cit-r.1   102616226   superoxide dismutase [Mn], mitochondrial 
 gma-u.5   100785490   superoxide dismutase [Mn], mitochondrial 
 gma-u.5   100101896   MnSOD 
 vvi-u.5   MNSOD   manganese superoxide dismutase 
 ppo-u.5   7455231   superoxide dismutase [Mn], mitochondrial 
 ppo-u.5   7477763   superoxide dismutase [Mn], mitochondrial 
 mtr-u.5   25489848   superoxide dismutase [Mn], mitochondrial 
 sly-u.5   101256386   Mn-superoxide dismutase 
 sot-r.1   102584005   superoxide dismutase [Mn], mitochondrial 
 nta-r.1   107830263   superoxide dismutase [Mn], mitochondrial 
 nta-r.1   107829594   superoxide dismutase [Mn], mitochondrial 
 nta-r.1   107803567   superoxide dismutase [Mn], mitochondrial 
 osa-u.5   4338417   superoxide dismutase [Mn], mitochondrial-like 
 zma-u.5   542764   superoxide dismutase 3 
 zma-u.5   100193398   superoxide dismutase [Mn] 3.4, mitochondrial 
 tae-r.2   543471   superoxide dismutase [Mn], mitochondrial 
 tae-r.2   543249   superoxide dismutase [Mn] 3.1, mitochondrial 
 tae-r.2   123047259   superoxide dismutase [Mn] 3.1, mitochondrial 
 hvu-r.1   123428270   superoxide dismutase [Mn], mitochondrial 
 sbi-r.1   8058337   superoxide dismutase [Mn] 3.4, mitochondrial 
 bdi-r.1   100825602   superoxide dismutase [Mn] 3.1, mitochondrial 
 cre-r.1   CHLRE_13g605150v5   uncharacterized protein 

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Top 50 coexpressed genes to 107904452 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107904452 (ghi-r.1 coexpression data)

CoexMap""


ghiLOC107904452 | Entrez gene ID : 107904452    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 1 2 1 2 1 1 1 3 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
Function superoxide dismutase [Mn], mitochondrial
KEGG ghi04146 [list] [network] Peroxisome (210 genes)
GO BP
GO:0006801 [list] [network] superoxide metabolic process  (24 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (1525 genes)  IEA  
GO MF
GO:0004784 [list] [network] superoxide dismutase activity  (8 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (4664 genes)  IEA  
Protein XP_016686329.2 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  chlo 3,  mito_plas 3  (predict for XP_016686329.2)
Subcellular
localization
TargetP
other 6  (predict for XP_016686329.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107904452
ghi-r.1
for
107897935
ghi-r.1
for
107904849
ghi-r.1
for
107916272
ath-u.5
for
MSD1
ath-u.5
for
AT3G56350
bra-r.6
for
103841543
bra-r.6
for
MSD1
bra-r.6
for
103870420
bna-r.1
for
106452722
bna-r.1
for
106452637
bna-r.1
for
106434588
cit-r.1
for
102616226
gma-u.5
for
100785490
gma-u.5
for
100101896
vvi-u.5
for
MNSOD
ppo-u.5
for
7455231
ppo-u.5
for
7477763
mtr-u.5
for
25489848
sly-u.5
for
101256386
sot-r.1
for
102584005
nta-r.1
for
107830263
nta-r.1
for
107829594
nta-r.1
for
107803567
osa-u.5
for
4338417
zma-u.5
for
542764
zma-u.5
for
100193398
tae-r.2
for
543471
tae-r.2
for
543249
tae-r.2
for
123047259
hvu-r.1
for
123428270
sbi-r.1
for
8058337
bdi-r.1
for
100825602
cre-r.1
for
CHLRE_13g605150v5

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Ortholog ID: 5295
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit gma gma vvi ppo ppo mtr sly sot nta nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC107904452 LOC107897935 LOC107904849 MSD1 AT3G56350 LOC103841543 MSD1 LOC103870420 LOC106452637 LOC106434588 LOC125578451 LOC102616226 LOC100785490 LOC100101896 MNSOD LOC7455231 LOC7477763 LOC25489848 LOC101256386 LOC102584005 LOC107830263 LOC107829594 LOC107803567 LOC4338417 LOC542764 LOC100193398 LOC543471 LOC543249 LOC123047259 LOC123428270 LOC8058337 LOC100825602 CHLRE_13g605150v5
Function* superoxide dismutase [Mn], mitochondrial superoxide dismutase [Mn], mitochondrial superoxide dismutase [Mn], mitochondrial manganese superoxide dismutase 1 Iron/manganese superoxide dismutase family protein superoxide dismutase [Mn] 2, mitochondrial superoxide dismutase [Mn] 1, mitochondrial superoxide dismutase [Mn] 1, mitochondrial superoxide dismutase [Mn] 1, mitochondrial-like superoxide dismutase [Mn] 1, mitochondrial superoxide dismutase [Mn] 2, mitochondrial-like superoxide dismutase [Mn], mitochondrial superoxide dismutase [Mn], mitochondrial MnSOD manganese superoxide dismutase superoxide dismutase [Mn], mitochondrial superoxide dismutase [Mn], mitochondrial superoxide dismutase [Mn], mitochondrial Mn-superoxide dismutase superoxide dismutase [Mn], mitochondrial superoxide dismutase [Mn], mitochondrial superoxide dismutase [Mn], mitochondrial superoxide dismutase [Mn], mitochondrial superoxide dismutase [Mn], mitochondrial-like superoxide dismutase 3 superoxide dismutase [Mn] 3.4, mitochondrial superoxide dismutase [Mn], mitochondrial superoxide dismutase [Mn] 3.1, mitochondrial superoxide dismutase [Mn] 3.1, mitochondrial superoxide dismutase [Mn], mitochondrial superoxide dismutase [Mn] 3.4, mitochondrial superoxide dismutase [Mn] 3.1, mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 6
ghi00190 Oxidative phosphorylation 3
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi01200 Carbon metabolism 2
ghi00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 6
ghi00190 Oxidative phosphorylation 3
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi01200 Carbon metabolism 2
ghi00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 6
ghi00190 Oxidative phosphorylation 3
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi01200 Carbon metabolism 2
ghi00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 5
ath01200 Carbon metabolism 4
ath00710 Carbon fixation by Calvin cycle 3
ath00010 Glycolysis / Gluconeogenesis 2
ath01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 3
bra00380 Tryptophan metabolism 2
bra00460 Cyanoamino acid metabolism 2
bra00910 Nitrogen metabolism 2
bra00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 9
bra00220 Arginine biosynthesis 2
bra01210 2-Oxocarboxylic acid metabolism 2
bra01230 Biosynthesis of amino acids 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00073 Cutin, suberine and wax biosynthesis 3
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 4
cit00010 Glycolysis / Gluconeogenesis 3
cit00710 Carbon fixation by Calvin cycle 3
cit01230 Biosynthesis of amino acids 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 3
gma01200 Carbon metabolism 3
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 7
gma01200 Carbon metabolism 3
gma04146 Peroxisome 2
gma00020 Citrate cycle (TCA cycle) 2
gma00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00010 Glycolysis / Gluconeogenesis 7
vvi01200 Carbon metabolism 7
vvi01230 Biosynthesis of amino acids 6
vvi00710 Carbon fixation by Calvin cycle 3
vvi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 6
ppo01200 Carbon metabolism 3
ppo00020 Citrate cycle (TCA cycle) 2
ppo00620 Pyruvate metabolism 2
ppo00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 3
ppo03015 mRNA surveillance pathway 2
ppo04136 Autophagy - other 2
ppo04382 Cornified envelope formation 2
ppo00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 7
mtr00020 Citrate cycle (TCA cycle) 4
mtr01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 11
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 11
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 3
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00010 Glycolysis / Gluconeogenesis 13
osa01200 Carbon metabolism 12
osa01230 Biosynthesis of amino acids 12
osa00710 Carbon fixation by Calvin cycle 6
osa00030 Pentose phosphate pathway 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 7
zma01200 Carbon metabolism 2
zma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 9
zma00020 Citrate cycle (TCA cycle) 2
zma01200 Carbon metabolism 2
zma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae04146 Peroxisome 3
tae03083 Polycomb repressive complex 3
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 6
tae04146 Peroxisome 3
tae03083 Polycomb repressive complex 3
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00620 Pyruvate metabolism 2
hvu00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 9
bdi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00020 Citrate cycle (TCA cycle) 3
cre01200 Carbon metabolism 3
cre01210 2-Oxocarboxylic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107904452 107897935 107904849 820263 824802 103841543 103847218 103870420 106452637 106434588 125578451 102616226 100785490 100101896 100233137 7455231 7477763 25489848 101256386 102584005 107830263 107829594 107803567 4338417 542764 100193398 543471 543249 123047259 123428270 8058337 100825602 5724629
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