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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107904546   uncharacterized LOC107904546 
 ghi-r.1   107948009   uncharacterized LOC107948009 
 ghi-r.1   107922728   uncharacterized LOC107922728 
 ath-u.5   AT5G24460   RING-H2 zinc finger protein 
 bra-r.6   103874317   uncharacterized LOC103874317 
 bra-r.6   103837060   uncharacterized LOC103837060 
 bna-r.1   106348479   uncharacterized LOC106348479 
 bna-r.1   BNAC09G04390D   uncharacterized BNAC09G04390D 
 bna-r.1   106348255   uncharacterized LOC106348255 
 cit-r.1   102630660   uncharacterized LOC102630660 
 gma-u.5   100804392   uncharacterized LOC100804392 
 gma-u.5   100783319   uncharacterized LOC100783319 
 vvi-u.5   100854009   uncharacterized LOC100854009 
 ppo-u.5   7464470   uncharacterized LOC7464470 
 mtr-u.5   11440451   uncharacterized LOC11440451 
 sly-u.5   101250872   uncharacterized LOC101250872 
 sot-r.1   102589654   uncharacterized LOC102589654 
 nta-r.1   107803943   uncharacterized LOC107803943 
 nta-r.1   107802109   uncharacterized LOC107802109 
 osa-u.5   4342042   uncharacterized LOC4342042 
 zma-u.5   100275445   uncharacterized LOC100275445 
 tae-r.2   123165648   uncharacterized LOC123165648 
 tae-r.2   123159881   uncharacterized LOC123159881 
 tae-r.2   123148495   uncharacterized LOC123148495 
 hvu-r.1   123441497   uncharacterized LOC123441497 
 hvu-r.1   123407565   uncharacterized LOC123407565 
 hvu-r.1   123444701   uncharacterized LOC123444701 
 sbi-r.1   8065612   uncharacterized LOC8065612 
 bdi-r.1   100835592   uncharacterized LOC100835592 
 cre-r.1   CHLRE_01g012300v5   uncharacterized protein 

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Top 50 coexpressed genes to 107904546 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107904546 (ghi-r.1 coexpression data)

CoexMap"107904546"


ghiLOC107904546 | Entrez gene ID : 107904546    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 2 3 1 2 1 1 1 1 1 2 1 1 3 3 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_016686442.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_016686442.2)
Subcellular
localization
TargetP
chlo 7  (predict for XP_016686442.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107904546
ghi-r.1
for
107948009
ghi-r.1
for
107922728
ath-u.5
for
AT5G24460
bra-r.6
for
103874317
bra-r.6
for
103837060
bna-r.1
for
106348479
bna-r.1
for
BNAC09G04390D
bna-r.1
for
106348255
cit-r.1
for
102630660
gma-u.5
for
100804392
gma-u.5
for
100783319
vvi-u.5
for
100854009
ppo-u.5
for
7464470
mtr-u.5
for
11440451
sly-u.5
for
101250872
sot-r.1
for
102589654
nta-r.1
for
107803943
nta-r.1
for
107802109
osa-u.5
for
4342042
zma-u.5
for
100275445
tae-r.2
for
123165648
tae-r.2
for
123159881
tae-r.2
for
123148495
hvu-r.1
for
123441497
hvu-r.1
for
123407565
hvu-r.1
for
123444701
sbi-r.1
for
8065612
bdi-r.1
for
100835592
cre-r.1
for
CHLRE_01g012300v5


Ortholog ID: 7350
Species ghi ghi ghi ath bra bra bna bna bna cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu hvu hvu sbi bdi cre
Symbol LOC107904546 LOC107948009 LOC107922728 AT5G24460 LOC103874317 LOC103837060 LOC106348479 LOC106348255 LOC106366008 LOC102630660 LOC100804392 LOC100783319 LOC100854009 LOC7464470 LOC11440451 LOC101250872 LOC102589654 LOC107803943 LOC107802109 LOC4342042 LOC100275445 LOC123165648 LOC123159881 LOC123148495 LOC123441497 LOC123407565 LOC123444701 LOC8065612 LOC100835592 CHLRE_01g012300v5
Function* uncharacterized LOC107904546 uncharacterized LOC107948009 uncharacterized LOC107922728 RING-H2 zinc finger protein uncharacterized LOC103874317 uncharacterized LOC103837060 uncharacterized LOC106348479 uncharacterized LOC106348255 uncharacterized LOC106366008 uncharacterized LOC102630660 uncharacterized LOC100804392 uncharacterized LOC100783319 uncharacterized LOC100854009 uncharacterized LOC7464470 uncharacterized LOC11440451 uncharacterized LOC101250872 uncharacterized LOC102589654 uncharacterized LOC107803943 uncharacterized LOC107802109 uncharacterized LOC4342042 uncharacterized LOC100275445 uncharacterized LOC123165648 uncharacterized LOC123159881 uncharacterized LOC123148495 uncharacterized LOC123441497 uncharacterized LOC123407565 uncharacterized LOC123444701 uncharacterized LOC8065612 uncharacterized LOC100835592 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00061 Fatty acid biosynthesis 2
sly00780 Biotin metabolism 2
sly01212 Fatty acid metabolism 2
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 2
hvu03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00750 Vitamin B6 metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 3
cre03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107904546 107948009 107922728 832517 103874317 103837060 106348479 106348255 106366008 102630660 100804392 100783319 100854009 7464470 11440451 101250872 102589654 107803943 107802109 4342042 100275445 123165648 123159881 123148495 123441497 123407565 123444701 8065612 100835592 5715052
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