ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107904612	cell division cycle 20.2, cofactor of APC complex
ghi-r.1	107904607	cell division cycle 20.2, cofactor of APC complex
ghi-r.1	121223600	cell division cycle 20.2, cofactor of APC complex
ghi-r.1	121209582	cell division cycle 20.2, cofactor of APC complex
ath-u.5	CDC20.2	Transducin family protein / WD-40 repeat family protein
bra-r.6	103862229	cell division cycle 20.1, cofactor of APC complex
bra-r.6	103848411	cell division cycle 20.1, cofactor of APC complex
bna-r.1	106368745	cell division cycle 20.1, cofactor of APC complex
bna-r.1	111208183	cell division cycle 20.2, cofactor of APC complex
bna-r.1	106411477	cell division cycle 20.1, cofactor of APC complex
cit-r.1	102615822	cell division cycle 20.2, cofactor of APC complex-like
cit-r.1	102608283	cell division cycle 20.2, cofactor of APC complex-like
gma-u.5	100783578	cell division cycle 20.2, cofactor of APC complex
gma-u.5	100784841	cell division cycle 20.2, cofactor of APC complex
gma-u.5	100801495	cell division cycle 20.2, cofactor of APC complex
vvi-u.5	100261230	cell division cycle 20.2, cofactor of APC complex
vvi-u.5	100256145	cell division cycle 20.2, cofactor of APC complex
vvi-u.5	100250079	anaphase-promoting complex subunit cdc20-like
ppo-u.5	18106314	cell division cycle 20.2, cofactor of APC complex
ppo-u.5	7453542	cell division cycle 20.2, cofactor of APC complex
mtr-u.5	11444276	cell division cycle 20.2, cofactor of APC complex
mtr-u.5	25499951	cell division cycle 20.1, cofactor of APC complex
mtr-u.5	25499528	cell division cycle 20.2, cofactor of APC complex
sly-u.5	cdc20-1	cell division control 20-1
sly-u.5	101261334	cell division cycle 20.2, cofactor of APC complex-like
sot-r.1	102581964	cell division cycle 20.2, cofactor of APC complex-like
sot-r.1	102602712	cell division cycle 20.2, cofactor of APC complex-like
nta-r.1	107773142	cell division cycle 20.2, cofactor of APC complex
nta-r.1	107779511	cell division cycle 20.2, cofactor of APC complex
nta-r.1	107823939	cell division cycle 20.2, cofactor of APC complex
osa-u.5	4336870	cell division cycle 20.2, cofactor of APC complex
osa-u.5	4330430	cell division cycle 20.2, cofactor of APC complex
zma-u.5	100285215	cell division cycle protein 20
zma-u.5	100384140	cell division cycle202
tae-r.2	123190301	cell division cycle 20.2, cofactor of APC complex
tae-r.2	123112471	cell division cycle 20.2, cofactor of APC complex
tae-r.2	123104221	cell division cycle 20.2, cofactor of APC complex
hvu-r.1	123402456	cell division cycle 20.2, cofactor of APC complex-like
hvu-r.1	123399517	cell division cycle 20.2, cofactor of APC complex-like
hvu-r.1	123427742	cell division cycle 20.2, cofactor of APC complex-like
sbi-r.1	8080373	cell division cycle 20.2, cofactor of APC complex
sbi-r.1	110434575	cell division cycle 20.2, cofactor of APC complex-like
bdi-r.1	100843300	cell division cycle 20.2, cofactor of APC complex
bdi-r.1	100835337	cell division cycle 20.2, cofactor of APC complex
bdi-r.1	100831204	cell division cycle 20.2, cofactor of APC complex
cre-r.1	CHLRE_09g399911v5	uncharacterized protein

Top 50 coexpressed genes to 107904612 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107904612 (ghi-r.1 coexpression data)

CoexMap"107904612"

[Cytoscape]

Annotation

functional annotation

KEGG

ghi04120 [list] [network] Ubiquitin mediated proteolysis (368 genes)

GO BP

GO:1904668 [list] [network] positive regulation of ubiquitin protein ligase activity	(19 genes)	IEA
GO:1905786 [list] [network] positive regulation of anaphase-promoting complex-dependent catabolic process	(19 genes)	IEA
GO:0031145 [list] [network] anaphase-promoting complex-dependent catabolic process	(41 genes)	IEA

GO CC

GO:0005680 [list] [network] anaphase-promoting complex

(49 genes)

IEA

GO MF

GO:1990757 [list] [network] ubiquitin ligase activator activity	(19 genes)	IEA
GO:0010997 [list] [network] anaphase-promoting complex binding	(21 genes)	IEA
GO:0005515 [list] [network] protein binding	(10797 genes)	IEA

Protein

XP_016686528.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, chlo 1, cysk 1, cyto 1, mito 1, cysk_plas 1

(predict for XP_016686528.1)

Subcellular
localization
TargetP

other 6

(predict for XP_016686528.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107904612	ghi-r.1 for 107904607	ghi-r.1 for 121223600	ghi-r.1 for 121209582	ath-u.5 for CDC20.2	bra-r.6 for 103862229	bra-r.6 for 103848411	bna-r.1 for 106368745	bna-r.1 for 111208183	bna-r.1 for 106411477	cit-r.1 for 102615822	cit-r.1 for 102608283	gma-u.5 for 100783578	gma-u.5 for 100784841	gma-u.5 for 100801495	vvi-u.5 for 100261230	vvi-u.5 for 100256145	vvi-u.5 for 100250079	ppo-u.5 for 18106314	ppo-u.5 for 7453542	mtr-u.5 for 11444276	mtr-u.5 for 25499951	mtr-u.5 for 25499528	sly-u.5 for cdc20-1	sly-u.5 for 101261334	sot-r.1 for 102581964	sot-r.1 for 102602712	nta-r.1 for 107773142	nta-r.1 for 107779511	nta-r.1 for 107823939	osa-u.5 for 4336870	osa-u.5 for 4330430	zma-u.5 for 100285215	zma-u.5 for 100384140	tae-r.2 for 123190301	tae-r.2 for 123112471	tae-r.2 for 123104221	hvu-r.1 for 123402456	hvu-r.1 for 123399517	hvu-r.1 for 123427742	sbi-r.1 for 8080373	sbi-r.1 for 110434575	bdi-r.1 for 100843300	bdi-r.1 for 100835337	bdi-r.1 for 100831204	cre-r.1 for CHLRE_09g399911v5

Ortholog

Ortholog ID: 1990

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

LOC107904612

LOC107904607

LOC107924243

CDC20.2

CDC20.1

cdc20-1

Function^*