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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107905874   60S ribosomal protein L18a 
 ath-u.5   AT2G34480   Ribosomal protein L18ae/LX family protein 
 ath-u.5   AT3G14600   Ribosomal protein L18ae/LX family protein 
 gma-u.5   100306174   uncharacterized LOC100306174 
 gma-u.5   100306365   uncharacterized LOC100306365 
 gma-u.5   100527007   60S ribosomal protein L18a 
 vvi-u.5   100260572   60S ribosomal protein L18a-like 
 vvi-u.5   100265789   60S ribosomal protein L18a-like 
 vvi-u.5   100255695   60S ribosomal protein L18a-like 
 ppo-u.5   7468726   60S ribosomal protein L18a 
 ppo-u.5   112327162   60S ribosomal protein L18a 
 ppo-u.5   18109145   60S ribosomal protein L18a 
 mtr-u.5   11426758   60S ribosomal protein L18a-2 
 mtr-u.5   25494947   60S ribosomal protein L18a-2 
 mtr-u.5   11434737   60S ribosomal protein L18a-2 
 sly-u.5   101244736   large ribosomal subunit protein eL20y 
 sly-u.5   104645891   large ribosomal subunit protein eL20y 
 sly-u.5   104648652   large ribosomal subunit protein eL20 
 osa-u.5   4339625   large ribosomal subunit protein eL20-like 
 osa-u.5   4327004   60S ribosomal protein L18a-like 
 osa-u.5   4326865   large ribosomal subunit protein eL20-like 
 zma-u.5   100285865   60S ribosomal protein L18a 
 zma-u.5   100281633   60S ribosomal protein L18a 
 zma-u.5   100283101   60S ribosomal protein L18a 

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Top 50 coexpressed genes to 107905874 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107905874 (ghi-r.1 coexpression data)

CoexMap"107905874"


ghiLOC107905874 | Entrez gene ID : 107905874    
Species ghi ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna
Paralog 1 2 3 3 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0006412 [list] [network] translation  (1487 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (467 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
Protein XP_016688142.1 [sequence] [blastp]
XP_016688143.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  chlo 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_016688142.1)
nucl 6,  cyto 3,  cysk_nucl 3  (predict for XP_016688143.1)
Subcellular
localization
TargetP
other 6,  mito 5  (predict for XP_016688142.1)
other 9,  mito 3  (predict for XP_016688143.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107905874

.
ath-u.5
for
AT2G34480

.
ath-u.5
for
AT3G14600

.
gma-u.5
for
100306174

.
gma-u.5
for
100306365

.
gma-u.5
for
100527007

.
vvi-u.5
for
100260572

.
vvi-u.5
for
100265789

.
vvi-u.5
for
100255695

.
ppo-u.5
for
7468726

.
ppo-u.5
for
112327162

.
ppo-u.5
for
18109145

.
mtr-u.5
for
11426758

.
mtr-u.5
for
25494947

.
mtr-u.5
for
11434737

.
sly-u.5
for
101244736

.
sly-u.5
for
104645891

.
sly-u.5
for
104648652

.
osa-u.5
for
4339625

.
osa-u.5
for
4327004

.
osa-u.5
for
4326865

.
zma-u.5
for
100285865

.
zma-u.5
for
100281633

.
zma-u.5
for
100283101

.


Ortholog ID: 1037
Species ath gma gma sly sly osa osa zma zma bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT2G34480 LOC100500108 LOC100527007 LOC104645891 LOC101244736 LOC4327004 LOC4339625 LOC100281633 LOC100286074 LOC103870008 LOC100265789 LOC100255695 LOC7463806 LOC7468726 LOC25488911 LOC25494947 LOC123183122 LOC123070306 LOC123450440 LOC123444054 LOC107913779 LOC107913780 LOC106375951 LOC125603608 CHLRE_01g047750v5 LOC8063604 LOC8061833 LOC102581830 LOC102601848 LOC102619255 LOC102608044 LOC100846400 LOC100839514 LOC107821623 LOC107800392
Function* Ribosomal protein L18ae/LX family protein 60S ribosomal protein L18a 60S ribosomal protein L18a large ribosomal subunit protein eL20y large ribosomal subunit protein eL20y 60S ribosomal protein L18a-like large ribosomal subunit protein eL20-like 60S ribosomal protein L18a 60S ribosomal protein L18a-like 60S ribosomal protein L18a-2 60S ribosomal protein L18a-like 60S ribosomal protein L18a-like 60S ribosomal protein L18a 60S ribosomal protein L18a 60S ribosomal protein L18a-2 60S ribosomal protein L18a-2 60S ribosomal protein L18a 60S ribosomal protein L18a 60S ribosomal protein L18a-like 60S ribosomal protein L18a 60S ribosomal protein L18a 60S ribosomal protein L18a-2 60S ribosomal protein L18a-2-like 60S ribosomal protein L18a-2 ribosomal protein L18a 60S ribosomal protein L18a 60S ribosomal protein L18a 60S ribosomal protein L18a-like 60S ribosomal protein L18a-like 60S ribosomal protein L18a 60S ribosomal protein L18a 60S ribosomal protein L18a 60S ribosomal protein L18a large ribosomal subunit protein eL20-like large ribosomal subunit protein eL20
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
ppo03030 DNA replication 2
ppo03420 Nucleotide excision repair 2
ppo03430 Mismatch repair 2
ppo03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 12
ghi00590 Arachidonic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 12
bna04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 19
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
cit03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 18
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 16
nta04120 Ubiquitin mediated proteolysis 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 19
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818011 100500108 100527007 104645891 101244736 4327004 4339625 100281633 100286074 103870008 100265789 100255695 7463806 7468726 25488911 25494947 123183122 123070306 123450440 123444054 107913779 107913780 106375951 125603608 5715690 8063604 8061833 102581830 102601848 102619255 102608044 100846400 100839514 107821623 107800392
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